Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi419g00014 ATGGTTCCCCCACGAAACAAGTCTGAATGTGGTCAAAGTATCCGTTTCCAATCCAACCTGCAACCTGATCTGGGAGTAATCCATATAGATCAGACTTTTTGGGAAAATTGGCATGGAAATTATGTGAGTAATGCAGTCTTAATCAAAGATCCGACTGGGAAAGTTTTTAACATAGGTGTTAGTTACAAGAGTAAGGGTGGAGCTTTCTTAAAAGGGATCGATAACATGGTTGGATTCTATAGGTTAGAGGGGCCACATACTGTTGAATTTACATATAAGGGGGAAAGCAATTTTGACATTAGAGTGAGGAATCGAAATGGTCAGGAGATTCAGTATGGCAGCGTCTTGAATGATAATGTGGTTGTTACAGATTCTGACTCTGATGAAGAGGATCCTGAGGAGGACCCTATTGAACCTACTTACTGGGAAGTAACTTTGACAAAGGCTGCTGCCGATGGCACTGACCCATTGCATATCCCTGCTAAATTTGTGAGAGAAGTTGGCTTGAAAGAAAAGAAACATGTTTGGGTCATAGATGAATCTGCGCCTCACTTTCGCTGCAAAGTCATTCAACCTAAGAGGAATAGGAAGAGCTATGAGCGGTACCTAGGTTTGGGATGGTACCAATTCTGTCGCATGAAGAAGTTGAAAGAGGGAAATGTTATTAGTTTCTGGACACATTATGATCCAAAATTTATGTATGTTGCGATTAATTGCAGTTGA 723 0.4094 MVPPRNKSECGQSIRFQSNLQPDLGVIHIDQTFWENWHGNYVSNAVLIKDPTGKVFNIGVSYKSKGGAFLKGIDNMVGFYRLEGPHTVEFTYKGESNFDIRVRNRNGQEIQYGSVLNDNVVVTDSDSDEEDPEEDPIEPTYWEVTLTKAAADGTDPLHIPAKFVREVGLKEKKHVWVIDESAPHFRCKVIQPKRNRKSYERYLGLGWYQFCRMKKLKEGNVISFWTHYDPKFMYVAINCS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi419g00014 240 PANTHER B3 DOMAIN-CONTAINING 29 224 - -
Sebi419g00014 240 Gene3D - 134 239 IPR015300 -
Sebi419g00014 240 Gene3D - 13 107 IPR015300 -
Sebi419g00014 240 CDD B3_DNA 145 225 IPR003340 GO:0003677
Sebi419g00014 240 Pfam B3 DNA binding domain 143 225 IPR003340 GO:0003677
Sebi419g00014 240 ProSiteProfiles B3 DNA-binding domain profile. 142 240 IPR003340 GO:0003677
Sebi419g00014 240 SUPERFAMILY DNA-binding pseudobarrel domain 23 113 IPR015300 -
Sebi419g00014 240 SUPERFAMILY DNA-binding pseudobarrel domain 140 233 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi419g00014 Sebi-Chr419 702849 703733 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi419g00014 B3 4.4e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi419g00014 - - lja:Lj0g3v0174259.1 87.8113