Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi418g00034 ATGGATTCAGATCCAATTGGTAGCTTCTTCCTCCACAAGCCAAATGTTCTCAACTCTTTCCCTGAAGACATAAACCACCCCAAGTGGAAACTTAGTCCCAACAACAACATGGTGGAGGCCATAGTAACCACCAATGGCTCTTCTTCACCAACACGCACCAGCACCATCCCCTTCCAAGTCAACCTTAACTGTTATACCGATAATCACACCTCTCTGGGATCTTCTGATGACATGAGAACAGAAATGGACCTCTTCAAGGACAAGGACAACACTGATGACAGGGTTACCTCTGCCCCTGTCTCTGTCCCCAACAATGATCATAAACATGATCATTCTGATAATTCCCCTTTATTGGAATTCCAAATAAACACTGGTCTGAATCTTCTTACTACCAACAGTAGCAGTGATCAATCTATGGTGGACAATGGAATATTACCTAATCCAAGCCAAAAAACTAGGAACGAGGTGTCTGTTCTTCAAGCTGAGCTTGAGCGAACGAAGGTGGAGAATAATCGGTTAAAGGACATGCTTGAGGAGCTTAATAGCAATTACAATGCCCTGCAGATGCATTTGATGAGTATGATGCAAGACCAGAAGATGAAGGATGGTAAAAAACAGGAAGTGTTTGATGAAAAATTCAAAGAGAAGAAACAAGATGAGAATGAAGGAGTATTGGTGTCAAGACAGTTTATGGATCTTAGGTTAGCTACCAATATTGAGACAGATGAACCCTCTTCTTCATCTTTGGGAAGAAGTCAGGACAGAGCAGGATCAGCAGGGAGTAACATAGAAGTGGCTTCCATGGAACTAGGCACAAACAAGAATGGGAATGTTAGTGATGAAAGAGTTAGGTATGATCAAGAGAAGAAGGAATTTGATAGGGGGATTACTGAAAGAGAGGATAGCCCCCAAGATGATAAAATTCCAAGATTAAGTCCTCCAAAAAATGTTGATCAAGCTGAGGCCACCATGAGGAAGGCAAGAGTTTCTGTTAGAGCTCGATCAGAGGCACCAATGATCACTGATGGGTGTCAATGGAGAAAGTATGGACAGAAGATGGCCAAAGGAAACCCATGTCCTCGAGCTTATTATAGATGCACCATGGCTGCTGGTTGCCCAGTTAGAAAACAGGTGCAAAGGTGTGCTGAAGACAGAACAGTGCTTATCACAACATATGAAGGAAATCACAACCACCCTTTGCCTCCAGCAGCTATGGCAATGGCACAAACCACATCTTCAGCTGCAAGAATGTTACTTTCAGGATCAATGTCAAGCAGTGATGGCCTAATGAATGCAAACTTCCTGACAAGGACACTTCTTCCTTGCTCTTCTAGCATGGCAACAATCTCAGCATCTGCTCCATTCCCAACTGTTACACTTGACCTTACTCAATCTCCAAACCCTCTACAATTCCCAAGGCCTCCAAATCAGTTACAAATTCCCTTCCCTCAGAATTTTGCCAATTCCCCAGCATCTTTAATGCCTCAGATATTTGGTCAGGCACTCTACAACCAATCAAAGTTTTCTGGTCTACAAATGTCACAAGATGCAGCAGCAGGAGCAGGAGCAGATCCTTCACAATTGGGTAACCATCCACCACCAAACCTTGCTGACACAGTTACTGCTGCCATTGCTTCTGATCCAAACTTCACTGCAGCTTTAGCAGCAGCTATCACTTCCATTATTGGTGGAAAGTATTAA 1701 0.4339 MDSDPIGSFFLHKPNVLNSFPEDINHPKWKLSPNNNMVEAIVTTNGSSSPTRTSTIPFQVNLNCYTDNHTSLGSSDDMRTEMDLFKDKDNTDDRVTSAPVSVPNNDHKHDHSDNSPLLEFQINTGLNLLTTNSSSDQSMVDNGILPNPSQKTRNEVSVLQAELERTKVENNRLKDMLEELNSNYNALQMHLMSMMQDQKMKDGKKQEVFDEKFKEKKQDENEGVLVSRQFMDLRLATNIETDEPSSSSLGRSQDRAGSAGSNIEVASMELGTNKNGNVSDERVRYDQEKKEFDRGITEREDSPQDDKIPRLSPPKNVDQAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTVLITTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSSDGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTQSPNPLQFPRPPNQLQIPFPQNFANSPASLMPQIFGQALYNQSKFSGLQMSQDAAAGAGADPSQLGNHPPPNLADTVTAAIASDPNFTAALAAAITSIIGGKY 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi418g00034 566 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 128 563 IPR044810 GO:0003700
Sebi418g00034 566 MobiDBLite consensus disorder prediction 239 278 - -
Sebi418g00034 566 ProSiteProfiles WRKY domain profile. 335 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi418g00034 566 MobiDBLite consensus disorder prediction 86 113 - -
Sebi418g00034 566 FunFam probable WRKY transcription factor 31 325 402 - -
Sebi418g00034 566 SUPERFAMILY WRKY DNA-binding domain 333 401 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi418g00034 566 Coils Coil 149 197 - -
Sebi418g00034 566 MobiDBLite consensus disorder prediction 279 312 - -
Sebi418g00034 566 Gene3D WRKY domain 325 402 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi418g00034 566 MobiDBLite consensus disorder prediction 239 334 - -
Sebi418g00034 566 MobiDBLite consensus disorder prediction 515 535 - -
Sebi418g00034 566 SMART WRKY_cls 340 400 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi418g00034 566 Pfam WRKY DNA -binding domain 342 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi418g00034 Sebi-Chr418 661890 664390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi418g00034 81 564 WRKY Transcription Factor Family AT1G62300 48.713 2.85e-124 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi418g00034 WRKY 4.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi418g00034 - - qsa:O6P43_028660 680.633