Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi418g00007 ATGAGTTTGATGATGATGGATGCTGCACATAATCATCAAATCATGAGGGAAGAACGGGCTGCAACAGTCATTCAAACAGCATTTCGAGGATTCCTGGCCAGAAGAGCACTACGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCCGTAAGAAAACAAGCTGCTATAACTCTCCGGTGTATGCAAGCATTGGTGAGGGTTCAAGCTCGTGTTCGGGCAAGGCGTGTTCGCTTGGCATTGGAAAGTCAAACAGCACAACAGAAACTCCAGCAACAGCTTGCAAACGAAGCTCGTGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGCGTGGGGTCTGTTGAAGAAATTCAAGCCAAAATAATAAAGAGACAGGAGGCTGCAGCCAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGAACAAGGCAGCAGGCTGTTTCCTCCGGTTTTGAACCTGATAAAAGTAGTTGGGGTTGGAATTGGTTGGAAAGGTGGATGGCTGTACGTCCTTGGGAGAATCGCTTTCTTGACATTAATATGAGGGATGGAGTAATGGCAGACGGAAATGGAGCTATTGCAGACGGAAATGGAGCTATTGATGGTAAAAAAGGAATCAGACCTCAGTTAAGATCTGCTAACACAAAATCAATTCCACCAAATATTCATCCAAACCTTGCCAGTCAGAAAACTGGTACCTCTCTTTCTGATGGCTGTGATTCTTCTTCACCTAGCAAGTCAGCAGGTTTGCTAGAGACATCAAACACACAGTCTGTTAAACCAATATCTAATGCAAATGTTCAAAATCCCATTGAAGAAACCAACTCAAAATCTGAAACTCGAAGATCTCACAGTAATCCAAAGGAGAGAACCACACAGGTAGATAAACAGGCAAAAAAGCGATTATCTCTGCCTAACAATGGGGGAGGTCCTGGGGTTCAAACAACCAGACATCCTACAAGAAGTTATGTGAAAGGGACACATGGCCCTCAAAAGCCTATAAGGGATAAACCTAAGCTCAATGGAGGAGGGATGTGA 1065 0.4498 MSLMMMDAAHNHQIMREERAATVIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESQTAQQKLQQQLANEARVREIEEGWCDSVGSVEEIQAKIIKRQEAAAKRERAMAYALAHQWQAGTRQQAVSSGFEPDKSSWGWNWLERWMAVRPWENRFLDINMRDGVMADGNGAIADGNGAIDGKKGIRPQLRSANTKSIPPNIHPNLASQKTGTSLSDGCDSSSPSKSAGLLETSNTQSVKPISNANVQNPIEETNSKSETRRSHSNPKERTTQVDKQAKKRLSLPNNGGGPGVQTTRHPTRSYVKGTHGPQKPIRDKPKLNGGGM 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi418g00007 354 MobiDBLite consensus disorder prediction 317 331 - -
Sebi418g00007 354 SMART iq_5 16 38 IPR000048 GO:0005515
Sebi418g00007 354 SMART iq_5 39 60 IPR000048 GO:0005515
Sebi418g00007 354 Pfam IQ calmodulin-binding motif 18 38 IPR000048 GO:0005515
Sebi418g00007 354 ProSiteProfiles IQ motif profile. 41 68 IPR000048 GO:0005515
Sebi418g00007 354 MobiDBLite consensus disorder prediction 221 354 - -
Sebi418g00007 354 PANTHER IQ-DOMAIN 5-RELATED 11 319 - -
Sebi418g00007 354 ProSiteProfiles IQ motif profile. 17 45 IPR000048 GO:0005515
Sebi418g00007 354 MobiDBLite consensus disorder prediction 221 283 - -
Sebi418g00007 354 Gene3D - 16 59 - -
Sebi418g00007 354 MobiDBLite consensus disorder prediction 284 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi418g00007 Sebi-Chr418 130492 134884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi418g00007 9 326 IQD Protein Family AT3G22190 62.928 1.53e-103 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi418g00007 - - tpra:123923158 482.641