Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi416g00028 ATGCCTGGATTCTCAGACATTTCAACTCAATTGCAGAAATCACTATCTGAGGCACTAACCATTTTCTACCCTCTTGGAGGTAGAAGAAGTGATTCCTTCTCCATCAATTGCAACGATGAGGGTGCAATTTACATTGAAGCCTCAGTGAACATCAACATGGACAAGTTCCTAAAACCACCCAAAATAGAATTCATAAACAAATTGCTTCCATGTGAGCCAAACAAAAAGCACCCTTACCAACAAGTCTTGCCTCAACTTCAAGTCCAAGTAAACATTTTCAATTGTGGAGGGATAGCTATTGGGTTGTGCAATCTCCACACCATCCTTGATGCATTGTCTTGTAGTGCCTTCTTGAAAACTTGGTCTTCCATTTGCAATGGTTCAAGGGATGGAATTTCATTGCCAGATTTCTCCTCTGCTTCTTCTCTGTTCCCTCCAAGAAACACCTTTGGTGTACGTGCTGGTGTGCTGAATATTGACAAAAGCTCAGAGATTGAAGTTCAGTGCACCACAAGAAGATTCTTGTTCATGACCAAATCAATCAATGAACTTCAAGCCATGTCTGAAAATGATGGAATCTATCCTAGGCCTACACGTTACAAGGCAGTGTCTTCATTCATCTGTAAACACATGATTGTAGCATGCACAAAGGAACCTTGTGACAGAACTAGGCCAGTGGTAGTGTTACATGTTGTGGACATGAGGAAAAGGATGGGAGAACCATTCTCACAAGATTCTATTGGGAACTTGTTGTGGCCTGCAGTGGTGCTTTGTGAGAATGTTAACAAGGACAGTAAAGTTGGAGACTTGGTTAGACTTTTGGAGCAAGAAATTGGAAAGCTCACAAAGGAATTGTTTCTAAAAGTGCAAAATGATCATGGTTTTATGTGGAGTGATGAGTGTGCACAACTAATGCTTGAAGGAATGGCCAACAAAAACCCAATTTCGTTTGTGTTCACGAGCTGGGTTAATATGGGGTTCAGAGAATTGGACTTTGGTTGGGGAAAGCCTCTATGGCTAGCTCAACGAGGAGGCACTAAAGAAAGTATTCCAAACACAGTAGTGTTGATGGAAACGGATGAGGGAATAGAGGCGTGGGTGACAATGGAAGAGAAACATATTTCTATCTTGGAAAATGATGTAGAGTTCCTCAGATTTGCTTTGCTTAATCCTAGTGTTTCAAACATATAG 1191 0.4123 MPGFSDISTQLQKSLSEALTIFYPLGGRRSDSFSINCNDEGAIYIEASVNINMDKFLKPPKIEFINKLLPCEPNKKHPYQQVLPQLQVQVNIFNCGGIAIGLCNLHTILDALSCSAFLKTWSSICNGSRDGISLPDFSSASSLFPPRNTFGVRAGVLNIDKSSEIEVQCTTRRFLFMTKSINELQAMSENDGIYPRPTRYKAVSSFICKHMIVACTKEPCDRTRPVVVLHVVDMRKRMGEPFSQDSIGNLLWPAVVLCENVNKDSKVGDLVRLLEQEIGKLTKELFLKVQNDHGFMWSDECAQLMLEGMANKNPISFVFTSWVNMGFRELDFGWGKPLWLAQRGGTKESIPNTVVLMETDEGIEAWVTMEEKHISILENDVEFLRFALLNPSVSNI 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi416g00028 396 Gene3D - 2 156 IPR023213 -
Sebi416g00028 396 Gene3D - 167 386 IPR023213 -
Sebi416g00028 396 PANTHER F21J9.9 6 387 - -
Sebi416g00028 396 Pfam Transferase family 8 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi416g00028 Sebi-Chr416 673773 674963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi416g00028 11 378 Monolignol Biosynthesis Gene Families AT5G48930 22.310 5.12e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi416g00028 - - gmx:102667966 612.068