Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi415g00013 ATGGAAGAAGTTTGTCTGAATAATGAGCCACTTTTTGATGAAAGTGATGAGTTTGATGTTGAGGGGAACTCTTCTGTAGTAGAACATGATCTTGAATCTTTAAACTCACAACCAAAGAACTCTCCACTTCCAACTGTGGGTCTGGAGTTTGATTCCTTTGAAGACGTTTACAACTTCTACAATATCTATGCAAAGGAACAAGGCTTTGGCATTAGAGTGAGCAATTCATGGTTTAGATCAAAGAGAAAAGAGCGCTATAGGGCAAAACTTAGCTGCAGTAGTGCTGGTTTCAAGAAAAAGAGTGAGGCCAATAATCCAAGACCAGAAACAAGAACTGGTTGTCCTGCAATGATAGTGATTAAAATGGTTGACTCCAAGAGATGGAGGATAGTGGAAGTTGAGCTTCAACACAACCATCATGTGAGTCCACAGAGCAAACGGTTCTACAAGTCACATAAGAAAATGATCCTTGCAGCCAGAAAATCACAACCACTGCCAGAGCCTGTAACAGAAGTACATACCATCAAGTTATATCGAACAACTGTCATGGATCTTTCCAAGGTGTATACAAAAGAAATCTTCAAAAAGTTTCAATTTGAGGTTGAGGGCATGTACTCTTGCTTCAACACAAGACAGGTAAGTGTTAATGGATCTATAATAACATATGTTGTGAAAGAACGAGTTGAAGTTGAGGGAAATGAAAAGGGAGTTAAAAGTTTTGAAGTTTTATATGAGACCACAGGAATGGATATTCGTTGCATTTGCAGTTTGTTCAATTACAAAGGATATCTATGTAGACATGCATTGAATGTTCTCAATTATAATGGTATTGAGGAAGTCCCATCTCGATACATCCTGCAAAGGTGGAAGAGGGATTTCAAGCAAAGGTGTAATCAATACCATGTATCTGGTAATGATGATACCTATAATCCTATGTCCTGGTATACTCATCTGTTTACCAATGCCCTTCCAGTGTTAGAAGTAGGGGCACAGTCACAGGAGCATTATATGATTGCTTTAAAAGAACTTGAGGAGTTGTTAGAGAAGTTTGATATAGTGGATAGTAACTTGCTGTAA 1077 0.3825 MEEVCLNNEPLFDESDEFDVEGNSSVVEHDLESLNSQPKNSPLPTVGLEFDSFEDVYNFYNIYAKEQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMIVIKMVDSKRWRIVEVELQHNHHVSPQSKRFYKSHKKMILAARKSQPLPEPVTEVHTIKLYRTTVMDLSKVYTKEIFKKFQFEVEGMYSCFNTRQVSVNGSIITYVVKERVEVEGNEKGVKSFEVLYETTGMDIRCICSLFNYKGYLCRHALNVLNYNGIEEVPSRYILQRWKRDFKQRCNQYHVSGNDDTYNPMSWYTHLFTNALPVLEVGAQSQEHYMIALKELEELLEKFDIVDSNLL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi415g00013 358 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 158 IPR031052 GO:0006355
Sebi415g00013 358 SMART 26again6 251 278 IPR006564 GO:0008270
Sebi415g00013 358 Pfam FAR1 DNA-binding domain 58 142 IPR004330 -
Sebi415g00013 358 Pfam SWIM zinc finger 249 273 IPR007527 GO:0008270
Sebi415g00013 358 ProSiteProfiles Zinc finger SWIM-type profile. 240 276 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi415g00013 Sebi-Chr415 174691 176697 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi415g00013 FAR1 5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi415g00013 K17604 - gmx:100811666 345.895