Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi415g00006 ATGATTGAGATGGACTTTAATAGTGATGATTCAGCTGTTAATCTGGATGATGATAGGGACGTAAGTTATAGTGACTCTTCTAGCAGTCATGAAATGACTAGTGGAAATGATATACATAGTGATGAGGGAAATGAGTCTATTCACCCAGAGGCTGATAAGGATGAGGAGAATGATGTTATGGATACTGATGTTAGAGACGGTGTGTCAAGGAGGATAATTGACTTGACAAATGATGATATAAGGGCTTTGGAGTTCGCTAGTGAAGAGCATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTCAAGGTTTTGCTATGAGGAAGGATGATGTTATTCGAGACAAAAAAGAGATGGTCATAATGCGACAGTATTTATGTAGTAGGGCTGGTCTGAGGGACAAAAAGCATTTGATTAGGTTAGATTGGAAAAAGGAACACAGACCCCTTACCCGTACCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTCCTAATTATAGGGGATTGATTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTCTTGTTGATCAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAAGAAAGATTTTTACAACTACATAGATGAGGTTAAACGTGGTAAGATAAAAGATGGGGATGCTGTTGCTGGCTTAAGTTATTTGCAAGGAAAGGCGGATAATAATCCAATGGAATATAGGTACAAAGAATTGTTTTCTGACTTTAATTCTATTTATTTTGAACCTGTTCTTACTACCTCACTTCAGAAGATAGAGCGTCAAGCTTCTAAGGTGTTCACTTTGGATATTTTTAAAGATGTCAAGTATGAGATTGAAAGGGCAGGTGGTTTAAATGTAATTGAGCGTTCAATTGAAGGGGATAATGTTGTTTTCAAATTAAAAGAATATTGTAAGCCTCGTAGTGAACGCTTTGTTGTTTATGATAAAGAGAATTCTAAATTTGTTTGTGATTGTCGTCTGTTTGAATCTTGTGGCATTCCATGTCGACATATTTTTTGTGTTATGAGACTGGAGCACATAGATGTTATACCCCCATGTATGATTTGCAACCGATGGAGGAAGGATGATAAGAGTGACTTCATGATATCAGATGGTTTGGATGAGGTAGAACCTGACATGATGAGGGTTTGTCGTTTTGTGGTTACTAGCTCTCATTGTAACAGTCTTTGTGACATGGTTTCCCAAAAGCGTGAGCATTTTAAGGAGTTTATAAATGACATTATGAAGCTGAAACAGAAGTATGAGAGATTGTCTTCCAGTAGTAGCACAACTAATGTTAAGGAAAATGTTGTACAAGATCCCACAGTTGTGAAGAAGAAAGGTGCTCCTATGAAGATAAGGAAGAGGCGTAAGAGTAAGAGGTGTTCAAACTGTAACATTTCTGGACATGTTATCACAACCTGTCCTAGGTTGTTTCCACCAGAAGTTGATGAAGTCAACATTAATGACGAAGACCATGGTCCTGAGTCACAAACTCTTAGGAGGGATGCTGCCCAAAATGATGATGGAATCTCATCAGATGAAAATTTCCCTGACAGTAGCTCTAATCATGTGTCTGGAAGCAATAGTCATAGTCAGAGTATAATGTTTAGTGTGGAGAATCGTCCAACTACTGATAAAAGGAATATTAGGAAAAAGAAGATAAAGTCCCTTTCACAGATTTCTAACTCGGTCTGCGAAGTTAAACCTAGTCCCACTGAAGTGTTGAAAGGTCCCCATAGAGTTGGGGGAGATACTGCAGGTCCATCATCCACAGCAAAGCACCAAGTTGAAGGAGGTGTTTCTGTGAATCCCCCTGTCCAGAATGGTACATTTAGTTATGGCTATCATAACAATGTATCTGCACCATCTTTCAGCTACCAGTTACCAATTGTGGGACCTTCTTCTGTTGGAAACATACAAATACGTGAGGGAATGTCCATTACGTTACCTTTTCCAAATTCATTTGGTGTTCCTGTTTTACCAAGTCAAGGCAGTTGGTCTCAAATCAATCATGGCTTATTTCCTGTTTTACCTTCTTCTATGCATCATGGCTTATTTCCTTTGTTCCCAAATCAATCAACAGTTGGTCTCAATTATCAACAGTCCACGCATGTAGCAGGAATTGAAGATGCTAGTAGGCCTGGTGTTTGGAATGATCTACTGCAAGAAGTAATTAGAAAAAGTGTTTGTCCAAGTGATAATAGTGGGAAAAAATGA 2343 0.3841 MIEMDFNSDDSAVNLDDDRDVSYSDSSSSHEMTSGNDIHSDEGNESIHPEADKDEENDVMDTDVRDGVSRRIIDLTNDDIRALEFASEEHAFNFYFSYAKCQGFAMRKDDVIRDKKEMVIMRQYLCSRAGLRDKKHLIRLDWKKEHRPLTRTNCLAKLRVRFDYKTGKWKVVSFEESHNHDLTPAKFVPLIPNYRGLIDGDKAQVDALHSHGIRPCQIMGFLVDQKGGYRNVGFSKKDFYNYIDEVKRGKIKDGDAVAGLSYLQGKADNNPMEYRYKELFSDFNSIYFEPVLTTSLQKIERQASKVFTLDIFKDVKYEIERAGGLNVIERSIEGDNVVFKLKEYCKPRSERFVVYDKENSKFVCDCRLFESCGIPCRHIFCVMRLEHIDVIPPCMICNRWRKDDKSDFMISDGLDEVEPDMMRVCRFVVTSSHCNSLCDMVSQKREHFKEFINDIMKLKQKYERLSSSSSTTNVKENVVQDPTVVKKKGAPMKIRKRRKSKRCSNCNISGHVITTCPRLFPPEVDEVNINDEDHGPESQTLRRDAAQNDDGISSDENFPDSSSNHVSGSNSHSQSIMFSVENRPTTDKRNIRKKKIKSLSQISNSVCEVKPSPTEVLKGPHRVGGDTAGPSSTAKHQVEGGVSVNPPVQNGTFSYGYHNNVSAPSFSYQLPIVGPSSVGNIQIREGMSITLPFPNSFGVPVLPSQGSWSQINHGLFPVLPSSMHHGLFPLFPNQSTVGLNYQQSTHVAGIEDASRPGVWNDLLQEVIRKSVCPSDNSGKK 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi415g00006 780 MobiDBLite consensus disorder prediction 551 584 - -
Sebi415g00006 780 ProSiteProfiles Zinc finger SWIM-type profile. 352 387 IPR007527 GO:0008270
Sebi415g00006 780 SMART 26again6 362 389 IPR006564 GO:0008270
Sebi415g00006 780 Pfam FAR1 DNA-binding domain 93 183 IPR004330 -
Sebi415g00006 780 Coils Coil 779 780 - -
Sebi415g00006 780 PANTHER OS01G0519700 PROTEIN 293 500 - -
Sebi415g00006 780 MobiDBLite consensus disorder prediction 525 592 - -
Sebi415g00006 780 MobiDBLite consensus disorder prediction 525 550 - -
Sebi415g00006 780 MobiDBLite consensus disorder prediction 611 641 - -
Sebi415g00006 780 MobiDBLite consensus disorder prediction 35 62 - -
Sebi415g00006 780 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi415g00006 Sebi-Chr415 61051 64449 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi415g00006 FAR1 9.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi415g00006 - - ccaj:109806300 284.648