Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi415g00005 ATGTTGGGTGGGCTATATGGAGACTTACCTCCACCCTCTTCTTCCGAAGAAGAGAAACCAACCACCAATGTATGGTCCAGCAGCACCAAAATGGCCCCCGCCACCCTCCGCAAACCGGCCTCAATTTTCCAACCTCCACAGACCGTTCTGAGATCCCAGAACAAACCCAAAATTGTCAATTCTTCTTCGGTTCCCAAAATAGTGGTGTCGCCGGCACCAGTACCGGCTCCGGCAACGGACGACGTTGTGCAACCAGCTCTGTCGGAGACGGGAGGGTTGGGAGTTGGTGCGGGTGGGCAGATGACTGCGGCTCAGAGAATGATGGCGAAGATGGGGTGGAAGGAAGGGCAAGGGCTTGGGAAGCAGGAGCAAGGGATTACTACTCCTTTGATGGCCAAGAAAACGGATAGACGAGCTGGGGTTATTGTCAATGCTAGTGACAATAGCAAGAAAGTGAAGAGTGTCAACTTCCATGGAGTGCCTACAAAGGTGCTGCTGCTTAGAAACATGCCTGACAGGGTCGTATTTTATGTGGGGTGTATGGATAATTTTCTAGAGCATTGCTTTGAAGGGTGCCTTAAAGAATCTTAG 591 0.5127 MLGGLYGDLPPPSSSEEEKPTTNVWSSSTKMAPATLRKPASIFQPPQTVLRSQNKPKIVNSSSVPKIVVSPAPVPAPATDDVVQPALSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRRAGVIVNASDNSKKVKSVNFHGVPTKVLLLRNMPDRVVFYVGCMDNFLEHCFEGCLKES 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi415g00005 196 SMART G-patch_5 98 144 IPR000467 GO:0003676
Sebi415g00005 196 Pfam G-patch domain 103 142 IPR000467 GO:0003676
Sebi415g00005 196 MobiDBLite consensus disorder prediction 15 34 - -
Sebi415g00005 196 PANTHER SPLICING FACTOR 45 SPF45 1 64 IPR040052 GO:0045292
Sebi415g00005 196 ProSiteProfiles G-patch domain profile. 100 146 IPR000467 GO:0003676
Sebi415g00005 196 MobiDBLite consensus disorder prediction 1 48 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi415g00005 106 148 C2H2 Transcription Factor Family AT5G26610 53.488 1.05e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi415g00005 K12840 - gmx:100805487 147.132