Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi414g00070 ATGAACCATGGTGAGCATATTGGTTATATTTTGGTTATGGTCACTCTATCCATATCTCTGGTAGTTCTTGGTGTTATCCTGTTTTTCGCTTGCAAGAAGAAACCTGTTGAATCTGAAGAAACACTTCCTGTGAAGCTCTGTGCTCGTGCATACCCCTTGATGGAAATTGATGCTGCAACCGATGGTTTCAATCACAGGAGAATTGTGGGTCAGGGTCGCTTAGGAACTGTGTATGCAGGGACTCTGGAGAAAGAAGAGCTTGTAGCTGTAAAGCGCATTCATCCCTTTCTTGTGTTGAGTAATGCTGGATTTGGTTTCTCATCCGTTTTAAAATGGCTCTCTTTAGCTCAACACCCCAACGTGGTTCCAATAATAGGATTCTCAGAAGCACCAGGTGAGAGAGTTATAGTGATGGAGTTTATTCGCATGTCAAGTTTAGATTTTTACTTGCATCAGAACCAAGATGGGGCTTCCCTTTTGGATTGGAACAAGAGGTTCAGGATTGCAGCTGGAGCAGCTAGGGGGCTTCAATACCTACATGAAGTGGTAGCACCAAACATTGTACATGGGTGTGTTAAGTCCTCTAATGTTCTTATTGATATCAACTTTTGTGCTAGGATTTCTGATTATGGCCTTAACTTTTTGGCATCCTTAGAAAAGAGAGGGCTAGCAGGTTATGTGGATGATGAATATTGGAATGAAGGAAGGGTTGGTGGCGCTTCCAAGGAAAGTGACATTTATGGGTTAGGGGTGATCCTATTGGAGCTTTTAAGTGGGAGAAGATGTGAGGAAGGATTGCTGGTAAAGTGGGCATTGCCTTTGATCAAGGAAGTGAGGTTTAGTGAACTTTTGGATCCTAGGTTGGTGATTCCTTCTGATATTAAGCCTCTGGTTAGATTAGCCAAAGTTGCTTCAGCTTGTGTTGGTAATTTAAGGAAATGTAGACCTTGCGTGTCTCAAGTGGCAACCATTTTGAATAATATAGAGACGGAAGTGTGCCTCCTTAGGACGGTGAATGTTGCCTTCATCTCTGGTTCCGTGTGGGGTGGGGATTCTTTTGGTCATGAAAGTGACTTTTTTTCCATTTTAAATCTTGGTTTCCACCAGCTTATATAA 1116 0.4247 MNHGEHIGYILVMVTLSISLVVLGVILFFACKKKPVESEETLPVKLCARAYPLMEIDAATDGFNHRRIVGQGRLGTVYAGTLEKEELVAVKRIHPFLVLSNAGFGFSSVLKWLSLAQHPNVVPIIGFSEAPGERVIVMEFIRMSSLDFYLHQNQDGASLLDWNKRFRIAAGAARGLQYLHEVVAPNIVHGCVKSSNVLIDINFCARISDYGLNFLASLEKRGLAGYVDDEYWNEGRVGGASKESDIYGLGVILLELLSGRRCEEGLLVKWALPLIKEVRFSELLDPRLVIPSDIKPLVRLAKVASACVGNLRKCRPCVSQVATILNNIETEVCLLRTVNVAFISGSVWGGDSFGHESDFFSILNLGFHQLI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi414g00070 371 ProSiteProfiles Protein kinase domain profile. 63 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi414g00070 371 Gene3D Transferase(Phosphotransferase) domain 1 142 339 - -
Sebi414g00070 371 PANTHER OS01G0253100 PROTEIN 46 329 - -
Sebi414g00070 371 Pfam Protein tyrosine and serine/threonine kinase 66 321 IPR001245 GO:0004672|GO:0006468
Sebi414g00070 371 FunFam serine/threonine-protein kinase-like protein ACR4 30 140 - -
Sebi414g00070 371 FunFam Receptor protein kinase CRINKLY4 142 332 - -
Sebi414g00070 371 Gene3D Phosphorylase Kinase; domain 1 29 140 - -
Sebi414g00070 371 SUPERFAMILY Protein kinase-like (PK-like) 40 325 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi414g00070 Sebi-Chr414 765772 766887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi414g00070 48 325 Receptor kinase-like Gene Family AT3G59420 39.726 1.83e-54 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Sebi414g00070 PK_Tyr_Ser-Thr 7.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi414g00070 - - vun:114187437 592.808