Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi414g00068 ATGTTTAGGTTACCGTACCTTCATTACAGTGATGTGTGCATGCCGAGCGAGAGAGAACGAAGGGACACTGAAATTGAGCAGAGGGAGAGGGATAGCCGAGAAGGAATGAGAGAGGGTGTGAGAAGGCCTTCAAAAGCATACACAACTGGAACAAGGAAAAGAAGAAAGGTTCACACAGATGAAGAAGGAAGTGAAACAAGATGGCACAAAACGGGGAAAACTAGAGCAGTATATGCTGGTGGAGCTGTGAAAGGTTTTAAGAAGATTCTAGTACTCTACACTAACTATGGCAGGCAAAAGAAGCCTGAGAAGACTAATTGGGTGATGCATCAATACCATCTTGGCAGTAATGAAGAAGAGAAAGATGGAGAATTAGTTGTCTCAAAGGTCTTCTACCAAACACAACCTAGACATTGTGGTATAACTATAAGGGACCATCCATATGAAAACATATTATTGAATCATGGAAGTGGCCATCATAATAACAGTACATTAATACCTAAAAATGCAGCTCCTGTGGATTGCTACAGTACTGCTGCTCCTTATATAAATTATGAGCATGTGGGTCATAATAGAGAAAGCTCCCCACAACTTATTCCAAACTTGGTTGTCCAAGGTGATGGCCCTTTTATTCGCTTAGAAATGGATGCAAACAGAGCAAGACTCGAGAGAAAGTAA 678 0.413 MFRLPYLHYSDVCMPSERERRDTEIEQRERDSREGMREGVRRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRAVYAGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRHCGITIRDHPYENILLNHGSGHHNNSTLIPKNAAPVDCYSTAAPYINYEHVGHNRESSPQLIPNLVVQGDGPFIRLEMDANRARLERK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi414g00068 225 MobiDBLite consensus disorder prediction 18 41 - -
Sebi414g00068 225 ProSiteProfiles NAC domain profile. 1 133 IPR003441 GO:0003677|GO:0006355
Sebi414g00068 225 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 40 156 IPR044799 GO:0003700
Sebi414g00068 225 SUPERFAMILY NAC domain 44 133 IPR036093 GO:0003677|GO:0006355
Sebi414g00068 225 Pfam No apical meristem (NAM) protein 44 114 IPR003441 GO:0003677|GO:0006355
Sebi414g00068 225 Gene3D NAC domain 25 137 IPR036093 GO:0003677|GO:0006355
Sebi414g00068 225 MobiDBLite consensus disorder prediction 18 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi414g00068 Sebi-Chr414 747081 748293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi414g00068 32 221 NAC Transcription Factor Family AT1G28470 55.670 1.44e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi414g00068 NAM 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi414g00068 - - cave:132169802 274.248