Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi414g00052 ATGGCTTCTAATAGACACTGGCCAAGCATGTTCAAGTCTAAGCCCTGCAACCCTCACCACCAATGGCAGCATGACATCAACTCCTCTCTTATGTCATCTGGTTGCCATAGAAGTCCTTACACTTCAGCAGCAGGTTGTGAGGAGAGAAGTCCAGAGCCAAAGCCAAGGTGGAACCCAAAACCAGAACAAATTCGCATACTGGAAGCAATATTCAACTCTGGAATGGTGAATCCTCCAAGAGATGAAATAAGGAAGATCAGAGCACAGTTGCAAGAGTATGGCCAAGTTGGTGATGCTAATGTCTTCTACTGGTTCCAGAACCGCAAATCAAGGAGCAAGCACAAGCTTCGCCATCTCCAGAACTCAAAGAACGTGCAGAACTCTGAACCCCCACAAAACCCTCCAATCTCTCTCCCTCTCACACAAATCACTGCACCTAATTCATCCTCATCTTCTTCCTCTGAGATATCTTCCCCCAAAGAACTAATACCCACCAAGTGCAAGGAGTGGTGCCAAATACGTGAGATTATGATCCATAATGGACATGGAGCCTCAAAGAAAGACCAAGATGAAGACAAGTCTGTGAAAATAATGCACCAAACTCCACAGCTTAATTTCTGTGTCACTCCCACAAGTACTGTACTTGTACCACCCACCCCTTCCACCACCATTACTGTTCCATCCCCCATCATTTCTCAAGTTCAAGGCATTGGAGATCCAGGTGTTCCGGCGAGATCAACGGTTTTCATTAACGATGTGGCATTCGAGGTAGCGGTGGGACCTTTCAACGTGCGTGAGGCCTTTGGGGAAGATGCTGTGCTTATCCATGCCACTGGTCAGCCTGTTCTTACAAACCAATGGGGACTCACCCTCCAATCACTCCACCATGGTGCATCTTATTATCTGGAAGGAAATAGAAAGCTGAAGAATGGACTCATCAAGAATGGGGGGTTTTAG 957 0.4681 MASNRHWPSMFKSKPCNPHHQWQHDINSSLMSSGCHRSPYTSAAGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNSKNVQNSEPPQNPPISLPLTQITAPNSSSSSSSEISSPKELIPTKCKEWCQIREIMIHNGHGASKKDQDEDKSVKIMHQTPQLNFCVTPTSTVLVPPTPSTTITVPSPIISQVQGIGDPGVPARSTVFINDVAFEVAVGPFNVREAFGEDAVLIHATGQPVLTNQWGLTLQSLHHGASYYLEGNRKLKNGLIKNGGF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi414g00052 318 SUPERFAMILY Homeodomain-like 50 118 IPR009057 -
Sebi414g00052 318 SMART HOX_1 52 119 IPR001356 GO:0003677
Sebi414g00052 318 ProSiteProfiles 'Homeobox' domain profile. 50 115 IPR001356 GO:0003677
Sebi414g00052 318 Pfam Homeodomain 54 114 IPR001356 GO:0003677
Sebi414g00052 318 PANTHER WUSCHEL-RELATED HOMEOBOX 9 2 162 IPR044557 GO:0003700|GO:0050793
Sebi414g00052 318 MobiDBLite consensus disorder prediction 138 160 - -
Sebi414g00052 318 Gene3D - 54 120 - -
Sebi414g00052 318 CDD homeodomain 53 115 IPR001356 GO:0003677
Sebi414g00052 318 MobiDBLite consensus disorder prediction 37 61 - -
Sebi414g00052 318 FunFam WUSCHEL-related homeobox 11 54 121 - -
Sebi414g00052 318 MobiDBLite consensus disorder prediction 123 160 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi414g00052 2 302 Wox Gene Family AT5G45980 40.606 4.51e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sebi414g00052 Homeodomain 8.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi414g00052 - - cave:132172533 336.65