Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi414g00043 ATGGGTTCAGGCGATTGGTTTAAGTCAATAATTAGCTTAAGAAAATCAAAATCGGGCAGATCAAAGAAAGCAAAGGGTATCTTAGCTCAGGAGAATCTAAGTGCATTGAAGTCAAACAATTATACAGGAAAAGAGTCTAGTGGTTTAGCAAATGGTATTAAAAATGAAAATCTTGGGTCAGATGGGGTGTCAGTTGAAGTTATTGCAGCAACAAAGATCCAGACTGCATTCCGGGCTTATAAGGCTAGAAAAGCTCTACGTCGCTTGAAAGGGTTCACAAAACTGAAGGTCCTAACAGAAGGTTACTCTGTTAAAAAGCAAGCCAGTACAGCTATAACATACCTTCATTCATGGAGCAAGATACAGGCAGAGATTAGAACTCGCCGAATCTTTATGGTGACAGAAGACAGGATTAAGCGGAAGAAACTAGAGTCTCAACTAAAACTTGAGGCAAAGCTCCATGATCTGGAGGTTGAATGGTCTGGTGGTTCTGAAACCATGGAGGAAACCCTTGGAAGGATACATCAGAGAGAAGAAGCAGCAGTTAAGCGGGAAAGAGCCATGGCATATGCCTTTTCTCATCAGTGGAGGGCCAACTCTAGTCAGAGCCAAATGCTTGGTAATTATGAACTTGGCAAAGCTAACTGGGGTTGGAGCTGGAAGGAACGCTGGATTGCTGCTCGCCCATGGGAAAGCCGTGTCCATGGCATTAGCCCAAAGAAAGCTCAAAATAAGCAGTCAAGCAAGTCTCAGAAAGATAAGAGTGCATCAACAACACCTAAAACCCCTGCTTCAGCCAATGCAAAAGGGACTCCTCCTTTGGGTAATGGAAAAGGGACTACAAAAGCTAGGAGATTGTCTTATCCACCCACAGAAAAAACTGTGGTTCAAGAAGGAGTGCAGCCAGTTCCTAAGAGAATAGCTTTAAAAGCCTGCCTCATGAGAGTGGTTCCCGTCATTGGCATACTTTATGACAGAAAGGCCTTCAAACCTGTTCTGAACCCTGCTGAAGTGGAAGCTGTATTTGATGCACCTTTGGAAATGTTTCTCAAGGATGAGAATCAGAGTCAGGAGGAGAGGCAGTGGATGGGAGAGAATTATCTGATACATTTGTTTGACTATGAAATTGAGCATAAGAACTACCTTATATGGGGCTTAACTGTTGGGATCTTGATAAAGGCTGCATCAGTTGTGTACCAACGACCCCCAGCTTTCATAGAGCAGAATCCTAAATTCAAGGTTCCTCGGATTTAA 1254 0.433 MGSGDWFKSIISLRKSKSGRSKKAKGILAQENLSALKSNNYTGKESSGLANGIKNENLGSDGVSVEVIAATKIQTAFRAYKARKALRRLKGFTKLKVLTEGYSVKKQASTAITYLHSWSKIQAEIRTRRIFMVTEDRIKRKKLESQLKLEAKLHDLEVEWSGGSETMEETLGRIHQREEAAVKRERAMAYAFSHQWRANSSQSQMLGNYELGKANWGWSWKERWIAARPWESRVHGISPKKAQNKQSSKSQKDKSASTTPKTPASANAKGTPPLGNGKGTTKARRLSYPPTEKTVVQEGVQPVPKRIALKACLMRVVPVIGILYDRKAFKPVLNPAEVEAVFDAPLEMFLKDENQSQEERQWMGENYLIHLFDYEIEHKNYLIWGLTVGILIKAASVVYQRPPAFIEQNPKFKVPRI 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi414g00043 417 MobiDBLite consensus disorder prediction 235 293 - -
Sebi414g00043 417 ProSiteProfiles IQ motif profile. 69 94 IPR000048 GO:0005515
Sebi414g00043 417 PANTHER IQ-DOMAIN 5-RELATED 1 266 - -
Sebi414g00043 417 Gene3D - 22 92 - -
Sebi414g00043 417 MobiDBLite consensus disorder prediction 239 266 - -
Sebi414g00043 417 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 290 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi414g00043 Sebi-Chr414 484512 491375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi414g00043 1 289 IQD Protein Family AT2G33990 52.595 1.14e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi414g00043 - - gmx:100813685 451.055