Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi413g00035 ATGAATCAACATTATATGGTGAGATCATGGACATTGGGCTACGATTCTGCATGTTTTTATTTCACTTGTGATATGATTTCACCATCGCTGATTGTTGAGACATGTGCATCTTTTTCTGTTGCTGTAACTATCACATCTGCATCTTCTGCACATTCTGCGGCTTCGATTCCAGGCTTGTCTTCTTCAGAGATTTTTGCTGCCTTTGCTAACTTACTCTTGCATCATACCGATAAGGATTCCAGAACAAAACTGGAATGGAGTCCATCACCAGAACCTTTCCACTTTGGAAGCTTCGGTTCTCTGGATCTTCACCGCGAAGAGGAGGACGCTCCCACCGGCGAGGACGAGGACGCTGGAGTTCAAGTCGCTCCGATCATCAAACTTGAAGAGATCGCTCTCTCCACTGGCGAAGAGGATGACGAACCTATTCTCGACCTCAAAATGAAGCTGCGACATTTAAACAAGAGTATCGATGTGGCAAGCGACTTGGAAACAAAGCTATCAAGAAACAAATTCAGGCTCTCCACAATCTCCATCGCGGAATCTCAAACACGCAAAAATGTTTGTGGACTTGATCGCTGCATTTGGATTTCATCAGAATTGAAAGAGATAATTGATGATTTGTCTAAAAAAGATCTACAACAATTGTTTACTGATATGACTAAGAGAATCTTTGTTTCTTGGAATTCTATTGTGTTTGTTATGCGTGCTTCTGATGCACAGAAGGTGTTTGATGAAATGGCTGTTAGAGATGTTGTGTTTTGGAGCTCCATGATCACTGTAACTCAGATGGGACAGTTTATGAAATTTGAGGACAAATCTGAGACATTTTCAAGTCACGGTGGACTGACTGCTGCTGGTGCTCAGGTTGTGATGGATGCTGTTAATAAGCCACAGAATATTACTTATAAAGGATTAACTGACTTGGTGACTGAGACAGATAAAATGAATGGAGCTGCTATATTAGAAGTGGTGAAAAATAATTTTGAAGATCATCTTATTCTCGGGGAAGAAGGAGGAATTATAGGAGATGCAACATCTGATTATCTCTGGTGCATTGATCCTTTAGATGAGACTACAAGCTTTGCACATGGCTATCCCAGCTTTGCTGTTTCTGTTGAAGTTCTATATCGAGGGAATCATCTTGCTGCTTCAGTGGTTGAGTTTGTTGGAGGTCCCATGTGTCGGAATACCCGCATTTTCTCTGCAACTGCTGGTGGTGGAGCATTCTGCAATGGCCAAAGGATCCAAGTGAATGCTACTAATCAGGTGGAACAATCTCTTCTGACTGAGAAAAACTTCTGGAAGATGTTTGATGTTGGTCTATATGAGCATTGTAGGAAGAAGCATGGAGCTGCTGTCAGTTTTGGAGAGGAGAAAGTTGTCAAGAGCTGGCAGCTATTATTGTGTGTTGCTGTTGGTCTCTGGGAAGGTCTTATCATTGGATTTGTAACCGAGTACTCTGCTAGCAATGCATATAACCCTGTGGAAGATGTTGCTGACTCCTACAGGACTGGCGCTGCTACTAATGTTATCTTTGGCCTTGCCTTGGGATACAAGTCTGTTATTATTTCAATTATTGCCAATGCAATCAGTGTTTTCGTGAGTTTTACCTTTGCTGCCATTGGCAAGGGATTTGCAATTGGGTCTGCTGCGCTAGTATCTTTGGCCTTATTTGGTGCTTTTGTCAACAGGGCAGGAATTTCAACTGTTGATGTCTTGACTCATGATAAGGTCTTTATTGGACTTTTAGTGGGTGCCATGCTTCCTTACTGGTTTGCTGCCATGTATGGCACTGCTGTTGCTGCTCTTGGGATGCTGAGTACCGTAGCCACTGGATTGGCCATTGAAGCATATGGTCCAATCAGTGACAATGCTGGAGCGAAGTTTGCAGAACAACATGATGAAATTTACAACTTTTGGTGGTTTATTTTTGGCCGCTCCTAG 1947 0.4263 MNQHYMVRSWTLGYDSACFYFTCDMISPSLIVETCASFSVAVTITSASSAHSAASIPGLSSSEIFAAFANLLLHHTDKDSRTKLEWSPSPEPFHFGSFGSLDLHREEEDAPTGEDEDAGVQVAPIIKLEEIALSTGEEDDEPILDLKMKLRHLNKSIDVASDLETKLSRNKFRLSTISIAESQTRKNVCGLDRCIWISSELKEIIDDLSKKDLQQLFTDMTKRIFVSWNSIVFVMRASDAQKVFDEMAVRDVVFWSSMITVTQMGQFMKFEDKSETFSSHGGLTAAGAQVVMDAVNKPQNITYKGLTDLVTETDKMNGAAILEVVKNNFEDHLILGEEGGIIGDATSDYLWCIDPLDETTSFAHGYPSFAVSVEVLYRGNHLAASVVEFVGGPMCRNTRIFSATAGGGAFCNGQRIQVNATNQVEQSLLTEKNFWKMFDVGLYEHCRKKHGAAVSFGEEKVVKSWQLLLCVAVGLWEGLIIGFVTEYSASNAYNPVEDVADSYRTGAATNVIFGLALGYKSVIISIIANAISVFVSFTFAAIGKGFAIGSAALVSLALFGAFVNRAGISTVDVLTHDKVFIGLLVGAMLPYWFAAMYGTAVAALGMLSTVATGLAIEAYGPISDNAGAKFAEQHDEIYNFWWFIFGRS 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi413g00035 648 SUPERFAMILY Carbohydrate phosphatase 286 431 - -
Sebi413g00035 648 Pfam Inorganic H+ pyrophosphatase 450 539 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Sebi413g00035 648 Pfam Inorganic H+ pyrophosphatase 595 628 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Sebi413g00035 648 Pfam Inorganic H+ pyrophosphatase 538 596 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Sebi413g00035 648 PRINTS Inositol monophosphatase superfamily signature 330 346 IPR000760 -
Sebi413g00035 648 PRINTS Inositol monophosphatase superfamily signature 406 429 IPR000760 -
Sebi413g00035 648 PRINTS Inositol monophosphatase superfamily signature 308 328 IPR000760 -
Sebi413g00035 648 PRINTS Inositol monophosphatase superfamily signature 351 367 IPR000760 -
Sebi413g00035 648 FunFam Inositol-1-monophosphatase 275 416 - -
Sebi413g00035 648 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 538 596 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Sebi413g00035 648 Gene3D - 281 433 - -
Sebi413g00035 648 Pfam Inositol monophosphatase family 282 431 IPR000760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi413g00035 Sebi-Chr413 852424 855117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi413g00035 455 627 Primary Pumps ATPases AT1G15690 54.335 6.79e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi413g00035 K01092 - gmx:100796770 242.276