Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi413g00027 | ATGTACGGACAGAGTAATTACGAGGCCGATTTGGCCGTTTTGGACTCTATTCGCCGCCACTTGTTGGGTGAGCCCGAATTAAAATTCGGGGCTCCGACAACAAATTCGGGTGACTCCAAAGTTTACTCTCGGAGCTCCAGTTTCAGCAGCTTGTACCCGTGTTTAAGTGACAATTGGGGCGAACTACCACTCAAAGAGGACGATTCCGAAGACATGGTTCTCTACGGTGTGCTCCGTGACGCCGTTAATGTTGGGTGGGTCCCATCTCTCGATGCCGGGTCACCCGAAAGCGTCTCATCGGGTTACCCGACGGAGATTAAGGTAAAACCCGAACCGGACGTCATGCCGCCGGAAAATGGAACCATGATGCTCGCGGCGGAGACGAAGGTGATCACGCCGGAGCAGCCGAAGGCTGCTCCAGCGAAGGGGAAGCACTACCGCGGCGTGAGACAACGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGAGACCCGGCGAAGAACGGGGCTCGGGTTTGGCTTGGAACGTTCGAGACCGCTGAGGATGCTGCTTTGGCTTACGATAGAGCTGCGTATAGGATGAGAGGTTCGAGAGCTTTGTTGAATTTTCCGCTTCGGATCAACTCCGGTGAACCCGACCCGGTTAGGGTGACATCGAAAAGGTCTTCTTCGCCGGAAAGTGGTTCATCGCCGGCGAAGAGGAAGAAGTTGGTGACAGCGGTTCAAGGAGGATTAAAACGGGGCAAGTGGGAAGTCAAGTGGTGGCACAGTGTACACGTGGAGAGCAATTATTGGTTAGTTAATGCGTAA | 807 | 0.5489 | MYGQSNYEADLAVLDSIRRHLLGEPELKFGAPTTNSGDSKVYSRSSSFSSLYPCLSDNWGELPLKEDDSEDMVLYGVLRDAVNVGWVPSLDAGSPESVSSGYPTEIKVKPEPDVMPPENGTMMLAAETKVITPEQPKAAPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPDPVRVTSKRSSSPESGSSPAKRKKLVTAVQGGLKRGKWEVKWWHSVHVESNYWLVNA | 268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi413g00027 | 268 | MobiDBLite | consensus disorder prediction | 214 | 229 | - | - | |
Sebi413g00027 | 268 | PANTHER | DNA-BINDING DOMAIN | 121 | 227 | IPR044808 | GO:0003700|GO:0009873 | |
Sebi413g00027 | 268 | MobiDBLite | consensus disorder prediction | 93 | 114 | - | - | |
Sebi413g00027 | 268 | MobiDBLite | consensus disorder prediction | 210 | 236 | - | - | |
Sebi413g00027 | 268 | CDD | AP2 | 144 | 203 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi413g00027 | 268 | Gene3D | AP2/ERF domain | 144 | 206 | IPR036955 | GO:0003700|GO:0006355 | |
Sebi413g00027 | 268 | ProSiteProfiles | AP2/ERF domain profile. | 145 | 203 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi413g00027 | 268 | SMART | rav1_2 | 145 | 209 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi413g00027 | 268 | Pfam | AP2 domain | 145 | 195 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi413g00027 | 268 | FunFam | Ethylene-responsive transcription factor 2 | 144 | 204 | - | - | |
Sebi413g00027 | 268 | SUPERFAMILY | DNA-binding domain | 145 | 205 | IPR016177 | GO:0003677 | |
Sebi413g00027 | 268 | PRINTS | Ethylene responsive element binding protein signature | 146 | 157 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi413g00027 | 268 | PRINTS | Ethylene responsive element binding protein signature | 169 | 185 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi413g00027 | Sebi-Chr413 | 654389 | 655195 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi413g00027 | 1 | 247 | AP2-EREBP Transcription Factor Family | AT4G17500 | 54.264 | 3.40e-81 | 243 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Sebi413g00027 | AP2 | 1.1e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi413g00027 | K09286 | - | gmx:100803653 | 320.472 |