Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi413g00019 ATGGGTATCAGGGGAATGGCTACTCCTGTTGAGCCTCCAAATGGGATCAAAACTGAAGGAAAGCATTACTATTCCATGTGGCAAACCCTGTTTGAGATTGACACAAAATATGTGCCCATCAAGCCTATTGGTCGTGGAGCCTATGGAATTGTGTGCTCTTCTGTGAATAGAGAAACCAATGAGAAAGTTGCAATCAAGAAGATGCAAAATGCCTTTGAGAATCGTATTGATGCACTCAGAACTTTGCGTGAACTGAAACTTCTTCGCCACCTTCACCATGAAAATGTGATTGCTTTGAAAGACATCATGATGCCTATTCATAGGAATAGTTTCAAGGATGTCTATCTGGTCTATGAACTCATGGACACCGACTTGCATCAGATTATTAAGTCTTCTCAAGCACTGTCTAATGATCACTGTCAATATTTCCTCTTACAGGTTTGGTAA 447 0.4072 MGIRGMATPVEPPNGIKTEGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKMQNAFENRIDALRTLRELKLLRHLHHENVIALKDIMMPIHRNSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLLQVW 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi413g00019 148 ProSitePatterns Protein kinases ATP-binding region signature. 43 67 IPR017441 GO:0005524
Sebi413g00019 148 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 36 147 - -
Sebi413g00019 148 FunFam Mitogen-activated protein kinase 23 131 - -
Sebi413g00019 148 Gene3D Transferase(Phosphotransferase) domain 1 121 147 - -
Sebi413g00019 148 ProSiteProfiles Protein kinase domain profile. 37 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi413g00019 148 Gene3D Phosphorylase Kinase; domain 1 24 120 - -
Sebi413g00019 148 SUPERFAMILY Protein kinase-like (PK-like) 29 147 IPR011009 -
Sebi413g00019 148 SMART serkin_6 37 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi413g00019 148 Pfam Protein kinase domain 38 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi413g00019 Sebi-Chr413 476603 477297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi413g00019 6 147 MAP Kinase Gene Family AT1G59580 85.211 9.65e-90 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi413g00019 Pkinase 3.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi413g00019 K20535 - gmx:100798863 272.322