Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi413g00014 ATGCGCGCGCACGAGAACCAGTTCAAGACGCCGGCCGGAAGCGTTGGCGCAGCCGTTGTCATCGGAGGATGGTGGTGCCAACGCATGCCGTCGCATCATGACGCGGTTCTCTTGCTCGTTCGAAGGAGCCACTGCCCGAAGATGTACTCGTGCAATCGGTGCCACAAGAAGAATTTCTCGGTGCTTTCTGACTTGAAGAGCCACATGAGGCACTGTGGAGAGTCCAAGTGGAAGTTGTTCGAACACATTGCCCTGTTTGAGGGTCACATGCCTGCTCTTGCGTTGGACGAAGAGGAGAAAGGGAAGCAAATGGTGATGGTGGAGGAAAGTGAAGATCCAAAAAGTGAATTGGGTAGTTGTTTTGTGAATGATGGGTTGCCCGAAGAGTTGTTTGATGATTTTGGTTCCATTGATAACTATTGTTTGCAGGAAGTCTTGAGGGTTTCTAGTAATTTCTCATGA 462 0.5022 MRAHENQFKTPAGSVGAAVVIGGWWCQRMPSHHDAVLLLVRRSHCPKMYSCNRCHKKNFSVLSDLKSHMRHCGESKWKLFEHIALFEGHMPALALDEEEKGKQMVMVEESEDPKSELGSCFVNDGLPEELFDDFGSIDNYCLQEVLRVSSNFS 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi413g00014 153 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 41 110 IPR044300 GO:0010044|GO:0010447
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi413g00014 Sebi-Chr413 369532 370069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi413g00014 1 97 C2H2 Transcription Factor Family AT1G34370 37.405 1.92e-19 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi413g00014 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi413g00014 - - gmx:100809135 144.436