Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi413g00009 ATGCAGCTGAAGATAGAAGAGTCTCCAGACACGGGGAAGAAAAATTGTTCTGAGCCTGCACTTAAGAGGCCAAGAATTGAGATCCCATCTCCATTACCAACTTTTAAGGTTCGGAAAGAGAAACTGGGGGACCGAATCACTGCTCTTCAGCAATTGGTTTCACCTTTTGGAAAGATCTTCATTGAAAGAAACCAACCCAACACGTTGTTTCTAGCACCATACAACTTAGGGGATAATTGGATGTTGGTTGTTGTCAATCCCACAGCTGAAATTGTTTATTACTTGGATTCATTGGGTGTCAATATTGGACAACATCCACAAATGAGGAAAATGTTTGATAATGCTATCAAGATTTACCGTGCTAACAAAGGCACTAAGGTGTCTAAAGTCAAATTTAGCAACATAAAGTGGACGATGATAAAGTGCCCTATCCAGGATAATGGTTCAGATTGTGGGTATTATGTGTTAAGATACATGAAGGAAATTTTACTCTGTAGTGAAGAAGGAGTAATCCCACATGAATACTTCCCTACCTACAGCTTCGAGAAATACTCTACTGAACGCATAGATGAAGTCAAGCAAGAGTGGTGCCGATATGTGTTGGAGAATATTATAACCAATAAGTAA 627 0.3939 MQLKIEESPDTGKKNCSEPALKRPRIEIPSPLPTFKVRKEKLGDRITALQQLVSPFGKIFIERNQPNTLFLAPYNLGDNWMLVVVNPTAEIVYYLDSLGVNIGQHPQMRKMFDNAIKIYRANKGTKVSKVKFSNIKWTMIKCPIQDNGSDCGYYVLRYMKEILLCSEEGVIPHEYFPTYSFEKYSTERIDEVKQEWCRYVLENIITNK 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi413g00009 208 CDD bHLH_AtbHLH_like 32 58 IPR045239 -
Sebi413g00009 208 MobiDBLite consensus disorder prediction 1 21 - -
Sebi413g00009 208 Gene3D Adenoviral Proteinase; Chain A 65 204 - -
Sebi413g00009 208 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 48 167 - -
Sebi413g00009 208 SUPERFAMILY Cysteine proteinases 69 164 IPR038765 -
Sebi413g00009 208 ProSiteProfiles Ubiquitin-like protease family profile. 1 162 IPR003653 GO:0006508|GO:0008234
Sebi413g00009 208 MobiDBLite consensus disorder prediction 1 23 - -
Sebi413g00009 208 Pfam Ulp1 protease family, C-terminal catalytic domain 70 163 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi413g00009 Sebi-Chr413 196312 199081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi413g00009 21 58 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G05170 89.474 1.65e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi413g00009 - - tpra:123885547 139.428