Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi413g00006 ATGGCACCCAGGAATGATGGACCAACTAAGAAACCAATGAATAGAGGAGCATGGACCCCAGAGGAAGATCAAAAGCTAGCCAAATGCATTGAAATTCATGGGCCAAAGAGGTGGAAGACTGTTGCTGTCAAATCAGACCCAATATCAAGAGGGGAAAACATATCAGATGAAGAAGAGGATTTGATTCTTAGGCTTCACAAACTTCTGGGAAACAGGTGGTCTTTGATAGCTGGGAGGCTTCCAGGGCGAACAGACAATGAAATTAAGAACTATTGGAATTCTCATTTGTGCAAAAAGTCAATCACAAAGAGTGAAGGACCCTATGGGTTTGATTGGATGAACAAGTACTTAGAATTTGATCAGATTCCTGACAACACAAATTTGTTCTGA 390 0.4128 MAPRNDGPTKKPMNRGAWTPEEDQKLAKCIEIHGPKRWKTVAVKSDPISRGENISDEEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKSITKSEGPYGFDWMNKYLEFDQIPDNTNLF 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi413g00006 129 Gene3D - 54 107 - -
Sebi413g00006 129 MobiDBLite consensus disorder prediction 1 20 - -
Sebi413g00006 129 SUPERFAMILY Homeodomain-like 13 92 IPR009057 -
Sebi413g00006 129 Pfam Myb-like DNA-binding domain 15 42 IPR001005 -
Sebi413g00006 129 Pfam Myb-like DNA-binding domain 55 96 IPR001005 -
Sebi413g00006 129 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 100 IPR017930 -
Sebi413g00006 129 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 9 103 - -
Sebi413g00006 129 CDD SANT 55 96 IPR001005 -
Sebi413g00006 129 Gene3D - 13 53 - -
Sebi413g00006 129 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 42 IPR017930 -
Sebi413g00006 129 ProSiteProfiles Myb-like domain profile. 10 96 IPR001005 -
Sebi413g00006 129 SMART sant 14 49 IPR001005 -
Sebi413g00006 129 SMART sant 50 98 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi413g00006 Sebi-Chr413 125036 125869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi413g00006 9 107 MYB Transcription Factor Family AT3G13540 48.276 4.58e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi413g00006 Myb_DNA-binding 4.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi413g00006 K09422 - gmx:100799575 179.489