Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi412g00001 ATGTCTCCGACGCCGGGATTCAACGTCCCACTCTTGCCGGAATCCAAAGCATCGGCGCATGAGCCGGCCTCCGTCTCCGGCGCCGTCTTCAACGTCGCCACGAGCATAGTCGGCGCCGGGATCATGTCAATTCCGGCAATCCTGAAGGTTCTCGGCGTGATTCCAGCTTTCGCCATGATTCTGATTGTGGCCGTGCTGGCAGAAGTTTCCGTGGACTTCCTCATGCGGTTCACGCATTCCGGTGAAACGACGACGTACGCTGGAGTCATGAGGGAGGCGTTTGGGCCACCAGGAGCACTAGCGGCTCAAGTTTGCGTCATAATCACCAACCTTGGGGGGGATGTGCTCTCTGGGAAGCAAAGTGGAGGTGAAGTGCACTTGGGAATTTTGCAACAGTGGTTTGGATTTCACTGGTGGACTTCACGGGAATTTGCTCTGTTTTTCACTTTGGTCTTCGTTATGCTTCCATTGGTCTTCTACCGTCGTGTAGAGTCCTTGAAGTACAGCTCTGCAATATCAACTCTTCTTGCAGTGGCATTTGTTGCAATATGCTCTGGGTTGGCTATTGTTGCTTTGGTGCAAGGGAAAACACAAACTCCTAGATTGTTTCCTCAGTTTGACTACCAAACCTCATTCTTTGATTTGTTCACTGCAGTTCCTGTTGTAGTCACAGCCTTCACATTTCATTTTAATGTGCATCCGATTGGGTTTGAGCTTGCCAAGCCATCTGATATGACAACAGCTGTTCGATTAGCATTATTGCTTTGTGCTGTTATTTACTCTACAATAGGTCTATTTGGGTACCTGTTATTTGGGGATTCAACCCAATCAGATATTCTTATCAATTTTGATCAGAATACTGATTCTGCAGTTGCTTCGTTTTTCAATAGTTTAATCCGTGTAAGCTATGCACTCCATATCATGCTGGTATTCCCTCTAGTGAACTTCTCTTTGAGAGCCAACATAGATGAATTACTCTTCTCCAAGAAGCCTCTGCTAGCCACCGACAACAAAAGATTTGTGATCCTTTCCCTGGTGTTGCTAGTCTTTTCCTACCTTGCAGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAATTTCTGGGATCAACATCTGCAGTGTGCCTTGCTTTCATTTTCCCTGGCATTATTGTTTTAAGGGATGCTCCAGGTATATCATCAAGAAGGGAAAAAATTGTAGCATTGATTATGATTATACTAGCTGTAGTTACTAGTGTGATTGCCATTTCCACCAACATATACAATGCTTTAAGTAGCAAGTCATAA 1287 0.453 MSPTPGFNVPLLPESKASAHEPASVSGAVFNVATSIVGAGIMSIPAILKVLGVIPAFAMILIVAVLAEVSVDFLMRFTHSGETTTYAGVMREAFGPPGALAAQVCVIITNLGGDVLSGKQSGGEVHLGILQQWFGFHWWTSREFALFFTLVFVMLPLVFYRRVESLKYSSAISTLLAVAFVAICSGLAIVALVQGKTQTPRLFPQFDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKPSDMTTAVRLALLLCAVIYSTIGLFGYLLFGDSTQSDILINFDQNTDSAVASFFNSLIRVSYALHIMLVFPLVNFSLRANIDELLFSKKPLLATDNKRFVILSLVLLVFSYLAAIAIPDIWYFFQFLGSTSAVCLAFIFPGIIVLRDAPGISSRREKIVALIMIILAVVTSVIAISTNIYNALSSKS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi412g00001 428 PANTHER AMINO ACID TRANSPORTER 14 411 - -
Sebi412g00001 428 Pfam Transmembrane amino acid transporter protein 23 415 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi412g00001 Sebi-Chr412 18326 20134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi412g00001 4 422 Amino Acid or Auxin Permease AAAP Family AT3G56200 58.605 9.97e-178 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi412g00001 - - gmx:100813056 688.723