Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi411g00025 ATGATCAATTTCAGGCTAGTGGAAACTGGTGGGACACAGCAAAGAAACATGAGGTTTGAAAGTGGTGCATCACAGTCTTCTTCTTCTGGCATCACCAACATAGGAAACTTTCCTTGGCAACCTTCAGATATGGCAGAAGACATGAATAAGCCAAGGTCTTCCTCTGTGCTTCACCCTCCAGATTCTGCCACTTCCAATGACCCCAACTTGCATATGATGGGTTTAGGCCTTTCTTCTCAAGCCATGGATTGGAATCAAGCATCTTTATTAAGAGGTGAAAAGGGTACAGAGAACAGTTTCAGGTCCATGTTGCAAGAGAATTTGAGCTCAACAAGAACAAATTTTCAGCAAGAAACTGGGATGGGGTTGTCTCAAGTTCAATGGAGGTCAGAGAAGATGTTTTCAACAGAGTCATCAACTAATGAATTCAATAAGCAAGTGAATAGGGGTTTCTCTTTGGATCAAAACCAGTTTAGTCCTCAATATAGCTCTGGGGACAGCACAGTGACAAGTCAAGGTTTGCCTTCTACTTTTCAGATGGATTCCTCCTCAGCTTTATATGGAAGCCCTTCAATATTACAAGGACTATTAGGACCTGACAATAATAATCAACCCCACCAACACCACCAAGGTGGTTTTCCATACACAACAACAAGCTATGGATCATTAATAAACTCTAATGAGTTGATTCCTTCTTGGTCTAAAGTTCCTCAATTCTTGAGAGCTTCACCTCCAAAACAACCACCTAATAACCAGTTGCATTTCACCAACAACACACCCTTTTGGAATGCCTCAGAGATCAAAGATGTTAGGTCCAGCTTCTACCCCTCTCTGCAACCCCCATTCTCCCCTCCAAATTTTGATGTACAGTCAAAGAATGTATCTGAAGTGAGGGAGTCAGGTGGTGTGGGAAAGAAAAGTGGGAATGAGGCAGCACCTAAAAGGCCTCGTAACGAAACCCCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTAGTGTCGCCTTTTGGAAAGAGTTCTGGTAAATCTAAGGAAGCTGAGGGTCCAAAGCAGGATCTTAGAAGCAGAGGGCTATGCTTGGTGCCAGTTTCTAGTACATTTCCAGTGACTCATGAAACCACAGTTGATTTTTGGACACCAACATTTGGAGGGAGTTCCAGATGA 1200 0.4317 MINFRLVETGGTQQRNMRFESGASQSSSSGITNIGNFPWQPSDMAEDMNKPRSSSVLHPPDSATSNDPNLHMMGLGLSSQAMDWNQASLLRGEKGTENSFRSMLQENLSSTRTNFQQETGMGLSQVQWRSEKMFSTESSTNEFNKQVNRGFSLDQNQFSPQYSSGDSTVTSQGLPSTFQMDSSSALYGSPSILQGLLGPDNNNQPHQHHQGGFPYTTTSYGSLINSNELIPSWSKVPQFLRASPPKQPPNNQLHFTNNTPFWNASEIKDVRSSFYPSLQPPFSPPNFDVQSKNVSEVRESGGVGKKSGNEAAPKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKSSGKSKEAEGPKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGSSR 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi411g00025 399 MobiDBLite consensus disorder prediction 19 39 - -
Sebi411g00025 399 MobiDBLite consensus disorder prediction 281 326 - -
Sebi411g00025 399 MobiDBLite consensus disorder prediction 191 215 - -
Sebi411g00025 399 MobiDBLite consensus disorder prediction 55 69 - -
Sebi411g00025 399 MobiDBLite consensus disorder prediction 338 368 - -
Sebi411g00025 399 CDD bHLH_AtbHLH_like 324 352 IPR045239 -
Sebi411g00025 399 MobiDBLite consensus disorder prediction 19 69 - -
Sebi411g00025 399 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi411g00025 Sebi-Chr411 827158 830044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi411g00025 91 399 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 38.539 1.18e-48 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi411g00025 - - gmx:100778697 585.104