Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi411g00002 ATGGACTCGCAGCAGCTTTTCCCTTTCAGTGTGACTAGTGCAGGATTACCTTACATGTCATCTTTTCCCTCTATTCCATCCCTACCCAACAGGCAGCTTGGATCCTGGAAAGTTGACTCAGGAAACTCACCTAATTCACCCTTTTCCACTCATTTTGATTCTGATACTCTTTCTGCACTGAGTGATAGCCAGGAGCAACAATTCTCTGGAGAAATCCTCTCTGGTATCAGCCCCTCATGTAAATCTTCACTGGAAACCAACCATTATGTGCATAGATCAATCTCATCTGTGGAAAGTCTCAGAGAGAGTTTGCAACTGTATTCTGCTAGGAGCTCTCTTCTACAGAATGCAAGTTGCAACCAGAAAATCAGACACGCATTGCTGGAACTAGAAACTGCTCTGATGGCCCCTGATGATGAAGAAGTTACCATGCCAAATACTCCATTGGCTGAGAGCACCAGGCCAACTACATCTGGCCAGAGATATAGGTCCTGGAGCCAGGAGCATCAGGGTTCACAATATATTCAAAGTCAGCCATCACCTGTTACTAGCAGCAGGCAGTCAAGTGAAGGTGTACATGTAGAGAAAAGACAAAAGTTGATGGAGGAAGCATCCCTACAAGGGTTCCCATCAAGCGATTTGAAGCAATTGCTGATTGCATGTGCCAGAGCCATGTCAGAAAACAACATGAAAGATTTTGATCAATTGATAGGGAAGGCTAGAACTGCTGTGTCTATCAATGGGGAGCCAATCCAGAGGCTTGGTGCATATATGGTAGAAGGGCTTGTAGCAAGGAAAGAAGCATCAGGGAATAGCATCTATCATGCCCTCAAGTGTAGAGAGCCTGAAGGCAAAGACTTACTCTCTTACATGCAATTGCTTTTTGAAATCTGCCCATACTTAAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCTGAAGCATGCAGAAATGAGGACCACATACACATCATAGACTTTCAGATTGCTCAGGGAACTCAATGGATGACCCTCCTTCAAGCTCTTGCAGCAAGACCTGGTGGGGCTCCCCATGTGCGAATCACAGGGATTGATGACCCTGTTTCCAAGTATGCTCGTGGGGATGGACTAGAGGTTGTTGGGAAAAGATTGGCCTTGATGTCTGAGAAATTTGGCATCCCAGTGGAGTTTCATGGAGTGCCTGTTTTTGCTCCTGAAGTGAAAAGAGATATGCTTGATATCAAGCCTGGGGAGGCTTTGGCTGTGAATTTTCCCTTGCAACTTCATCACACAGCTGATGAGAGTGTTGATGTGAGTAACCCAAGGGATGGACTTTTGAGATTGGTGAAGTCTCTTTCACCCAAGGTGGTCACACTGGTGGAGCAGGAATCAAACACAAACACAACTCCATTCTTCAACAGGTTCATAGAAACCTTGGATTACTACTTGGCAATCTTTGAGTCCATTGATGTCACCCTCTCAAGAAATAGCAAGGAGAGGATTAATGTGGAGCAACATTGTCTGGCCCGGGATATTGTGAATGTTATTGCTTGTGAAGGAAAGCAAAGGGTAGAGCGGCATGAACTGTTTGGCAAGTGGAAGTCAAGGTTAACAATGGCTGGCTTCCGTCAATGTCCTTTAAGCTCTTATGTGAATTCTGTGATAAGAAGCCTTCTGAGGTGCTATTCAGAACACTATACACTAGTGGAGAAGGATGGAGCCATGCTATTGGGGTGGAAGAACAGAAACTTGATATCAGCTTCAGCCTGGCACTGA 1755 0.4524 MDSQQLFPFSVTSAGLPYMSSFPSIPSLPNRQLGSWKVDSGNSPNSPFSTHFDSDTLSALSDSQEQQFSGEILSGISPSCKSSLETNHYVHRSISSVESLRESLQLYSARSSLLQNASCNQKIRHALLELETALMAPDDEEVTMPNTPLAESTRPTTSGQRYRSWSQEHQGSQYIQSQPSPVTSSRQSSEGVHVEKRQKLMEEASLQGFPSSDLKQLLIACARAMSENNMKDFDQLIGKARTAVSINGEPIQRLGAYMVEGLVARKEASGNSIYHALKCREPEGKDLLSYMQLLFEICPYLKFGYMAANGAIAEACRNEDHIHIIDFQIAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGDGLEVVGKRLALMSEKFGIPVEFHGVPVFAPEVKRDMLDIKPGEALAVNFPLQLHHTADESVDVSNPRDGLLRLVKSLSPKVVTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLSRNSKERINVEQHCLARDIVNVIACEGKQRVERHELFGKWKSRLTMAGFRQCPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKNRNLISASAWH 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi411g00002 584 ProSiteProfiles GRAS family profile. 205 584 IPR005202 -
Sebi411g00002 584 MobiDBLite consensus disorder prediction 146 189 - -
Sebi411g00002 584 Pfam GRAS domain family 214 583 IPR005202 -
Sebi411g00002 584 MobiDBLite consensus disorder prediction 141 196 - -
Sebi411g00002 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 198 580 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi411g00002 Sebi-Chr411 89943 91697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi411g00002 205 583 GRAS Transcription Factor Family AT1G50600 61.478 1.56e-174 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi411g00002 GRAS 5.7e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi411g00002 - - adu:107462432 969.148