Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi410g00075 ATGAGGTGGTGCAGTGAGGTTATCTCAGTGTCAAGGGCACATGCACTCGCTCCGATAATTACTGCTTCTTTCTGCAACACAAGTGTTGTTTTCCAAGTCCAAAAGCCTTTTTCAAAATTCAAATTCAACAGCTCTTTTTCTTCTCTCTCTCTCACCCATCGGAAGCTGTTGGCTGTTCAAGCACAGCCATCAAACTCAAGGGACGATTTTGATTTTGTGGTCGTCAATTTCTACCATTTTGTGTTCATCAAAGACCCACAAGCAGAAGTGGCCAAGCACCTTTCTTTCTTGGACTTGGAGGGTCTCAACATCAATGGAAGAATCTATTTGAATGAACAAGGGATTAATGCGCAGTATAGTGGGCCATCAAAAGATGCTATGGCATATGTCAACTGGTTAAAAGAGGATAGCAGGTTTTCTGACATCCTGGTTCAGATATCTCCATCAGAAAATGGACATGCCTTTCCAACATTGAAGTTGCGGTATAAGCCTTCATTATTTGAAGGTGGCATATCACATCTTCCATTGCTTGATCCTTCAATGCGGGCAATACCTTTAGAACCTTCAGAATGGAGAGATAGATTGGAGGCATTCAACAAAAATGATCTTCCATCAAAAGACGACCCTAAGAGAAATTACATTTTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCATAGGGCTCAGAAACCTAATGTGGACTGCTTTAGGAGTACTTCATTTGGACTGTCTCAGGAAGAGATCACTGCTTCAGATCCTTTATCAAATGTAGATAAAGAAAAAGCAAACATATTGATGTATTGCACCGGGGGTATTCGATGTGATGTGTATTCTACAATACTGAGGCAGCAGGGATTTCAGAATTTGTATACCCTCAAGGGAGGTGTTTCTCACTATTTAAAGAATGAAGGTCCTGCAGAATGGGTAGGAAACTTATTTGTATTTGACTCCCGTCTGTCTCTCCCTCCTTCTGTTTACTATCCTGGGGACACAACTGAAGCAGAGACTACTCCAGTTTCTGGAGATGATAGGTTTGCAAAATGCTACATATGTAATTCGGAAGTCAGTGAATTGAGACATAGGAACTGTGCAAATCTTGACTGTAATTTTCTTTTTCTATGCTGTAGAAAATGTGTAAAGGATCTAAGAGGATGTTGTTGTTTGACTTGCACTACTGCTCCTCGGCTTAGACCTGTTTTAAATGGATATCAGAGATACAAAAAGTGGCACATCTATCGTGATATGGATTTGCACGGCAATATGAGAACTTCAAATTGA 1290 0.4031 MRWCSEVISVSRAHALAPIITASFCNTSVVFQVQKPFSKFKFNSSFSSLSLTHRKLLAVQAQPSNSRDDFDFVVVNFYHFVFIKDPQAEVAKHLSFLDLEGLNINGRIYLNEQGINAQYSGPSKDAMAYVNWLKEDSRFSDILVQISPSENGHAFPTLKLRYKPSLFEGGISHLPLLDPSMRAIPLEPSEWRDRLEAFNKNDLPSKDDPKRNYILLDVRNGYEWDIGHFHRAQKPNVDCFRSTSFGLSQEEITASDPLSNVDKEKANILMYCTGGIRCDVYSTILRQQGFQNLYTLKGGVSHYLKNEGPAEWVGNLFVFDSRLSLPPSVYYPGDTTEAETTPVSGDDRFAKCYICNSEVSELRHRNCANLDCNFLFLCCRKCVKDLRGCCCLTCTTAPRLRPVLNGYQRYKKWHIYRDMDLHGNMRTSN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi410g00075 429 Pfam UPF0176 acylphosphatase like domain 73 164 IPR040503 -
Sebi410g00075 429 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 206 325 IPR036873 -
Sebi410g00075 429 CDD RHOD_YceA 186 305 - -
Sebi410g00075 429 Gene3D - 179 333 IPR036873 -
Sebi410g00075 429 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 65 415 IPR020936 -
Sebi410g00075 429 Gene3D - 60 166 - -
Sebi410g00075 429 SMART rhod_4 199 309 IPR001763 -
Sebi410g00075 429 Pfam Rhodanase C-terminal 314 395 IPR022111 -
Sebi410g00075 429 Pfam Rhodanese-like domain 210 304 IPR001763 -
Sebi410g00075 429 ProSiteProfiles Rhodanese domain profile. 209 312 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi410g00075 Sebi-Chr410 833592 841714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi410g00075 71 420 Sulfurtransferasese or Rhodanese AT1G17850 69.613 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi410g00075 - - gmx:100814358 717.998