Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi410g00046 ATGGCGAGGCTAGACAGGACAGGGAGAAATAAAAGCTTAGAGACTCTAATGGACTCACACAAACCAGGAACCGCAAGAAATGTGAACCAACTGAGGCCCCACAAGTCCATTCCTAGCTATGGCTTAGAATTCAGTAACCTCTCATATAGTATCATAAAGAAGCATAGAAAAGATGGTGTTTGGATCAAGAAAGAAGCATATCTTCTTCATGATATCTCTGGCCAGGCAATCAAAGGTGAAATTATGGCAATCATGGGGCCTAGTGGTGCTGGAAAATCCACCTTTCTTGATGCCTTGGCTGGTCGAATTGCAAAAGGGAGTCTAGAAGGATCTGTTAGAATTGATGGAAAGCCAGTAACTGCAAGCTATATGAAAAGGGTGTCATCATATGTGATGCAAGATGACCAGCTCTTCCCTATGTTGACAGTTTTTGAAACATTTATGTTTGCAGCTGAAGTTAGGCTTCCTCCTTCTGTTTCCAGGGAAGAAAAGAAGAAGAGGGTTTATGAACTCCTTGATACACTGGGATTACAGAGTGCTACACATACCTATATTGGTGACGAGGGAAGGAGAGGAGTGTCAGGAGGGGAACGGCGAAGGGTATCCATTGGCATAGACATCATTCATAAGCCATCACTTCTGTTTCTGGACGAACCAACCTCAGGACTTGATTCAACAAGTGCTTACAGTGTAGTGGAAAAGGTTAAAGACATAGCTCGAGGTGGTAGCATTGTCCTTATGACCATACATCAGCCTTCATTTAGAATTCAAATGCTGCTGGACAAGATAACAGTCCTTGCAAGGAGAAGTGCTCAAACACCAAGGAACATCATGACTAGTGGTGTTTACCCACGCTTGGCTTCTCAGTTCTACAAAGATTTCTCAGCTAAAGATTTCTCTGTCTGGCTCTATCATGGTGTAGTAGGAACCCCCCGTCGCCAACCATCATGGACTCCAGCAAGAACTCCAGGATGGACACCTGGGGCTGGGAAAACACCCATGTCAGGACCAAGAAGTGTCATTTCAAACCAACATTCTGCAGCTTATCAGGATCCATATCGCCCCAAAACTCCTGCAGTGGTTAGCCAGTCTATGGACTACTCTGCAACTTCATATGCACCTTCCTATGAAGAGTTTGAGATTGAGGAAGTGCTTGATGAGCCAAACCTTGGACCCAAGTATGCAAACCCATGGTTGCGTGAGGTTGTAGTGCTTTCATGGCGAACAGCACTCAATGTAATTCGCACCCCAGAACTCTTCCTCTCCCGTGAGATTGTGCTAACTGTTATGGCACTTGTCCTGTCCACCATTTTCAAAAGACTTAATCATAATAGTTTCAAAGACATCAATAGGCTCCTCAATTTCTACATCTTTGCAGTGTGCCTTGTTTTCTTCTCCTCCAATGATGCAGTGCCATCTTTTATCATGGAAAGGTTTATCTTCATCAGGGAGACTTCCCACAATGCTTACCGTGCTTCTTCATATGTCATTTCTTCCCTCATTGTTTACCTCCCATTTTTTGCTGTTCAAGGCCTCACATTTGCCGCCATAACCAAATTAATGCTCCGCTTGCAAAGCAGCCTATTCCATTTCTGGATGATACTTTATGCCTCCCTCATTACTACCAATGCATATGTGATGCTTGTCAGTGCACTTGTGCCTAGTTACATAACAGGGCTCTTCTTCTATTTGGTTTTGAGATTCTACTCCAAAAATGAGAGAAAATGA 1728 0.4375 MARLDRTGRNKSLETLMDSHKPGTARNVNQLRPHKSIPSYGLEFSNLSYSIIKKHRKDGVWIKKEAYLLHDISGQAIKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLEGSVRIDGKPVTASYMKRVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSVSREEKKKRVYELLDTLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDKITVLARRSAQTPRNIMTSGVYPRLASQFYKDFSAKDFSVWLYHGVVGTPRRQPSWTPARTPGWTPGAGKTPMSGPRSVISNQHSAAYQDPYRPKTPAVVSQSMDYSATSYAPSYEEFEIEEVLDEPNLGPKYANPWLREVVVLSWRTALNVIRTPELFLSREIVLTVMALVLSTIFKRLNHNSFKDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFAAITKLMLRLQSSLFHFWMILYASLITTNAYVMLVSALVPSYITGLFFYLVLRFYSKNERK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi410g00046 575 Gene3D - 41 284 IPR027417 -
Sebi410g00046 575 SMART AAA_5 78 279 IPR003593 GO:0016887
Sebi410g00046 575 MobiDBLite consensus disorder prediction 1 31 - -
Sebi410g00046 575 Pfam ABC transporter 69 221 IPR003439 GO:0005524
Sebi410g00046 575 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524|GO:0016887
Sebi410g00046 575 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 295 IPR003439 GO:0005524
Sebi410g00046 575 MobiDBLite consensus disorder prediction 1 16 - -
Sebi410g00046 575 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 268 IPR027417 -
Sebi410g00046 575 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 27 566 - -
Sebi410g00046 575 Pfam ABC-2 type transporter 402 563 IPR013525 GO:0016020|GO:0140359
Sebi410g00046 575 MobiDBLite consensus disorder prediction 313 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi410g00046 Sebi-Chr410 512042 514918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi410g00046 20 389 Calmodulin-binding Proteins AT2G36910 21.900 4.94e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi410g00046 K05681 - smo:SELMODRAFT_134275 510.375