Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi410g00038 ATGGAAGACCTCATCGGCCTTCTAAGGATTCACATCAAGCGAGGCGTCAACCTCGCTGTTCGTGATGTCAGCACTAGTGATCCATACGTCGTCGTTAAGATGGGTCATCAGAAACTGAAGACTCGTGTGATAAAAAAGGACATCAATCCTGAGTGGAATGAAGAGCTTACACTTTCTGTTACACATCCTGTTGTTCCATTCTTACTGACGGTGTATGACCATGACACTTTTACCAAAGATGACAAAATGGGAGATGCAGAATTTGATCTATCACCATATATAGAAGCCTTGAAGATGAACTTAGAAGACCTGCCAAGTGGTACCATAATCACAAGAATACACCCGTGCAGACAAAACTGCTTGGCAGAGGATAGCTGCATCACTTATGATGATGGCAAAATTGTCCAAAATGTTGTCCTTAGATTGCGACACGTGGAGTGTGGTGAAGTGGAATTGCAATTACAATGGATTGATCTTCCTGGTGCCAAGGGGTTTATCTTAATTAATTAA 510 0.4216 MEDLIGLLRIHIKRGVNLAVRDVSTSDPYVVVKMGHQKLKTRVIKKDINPEWNEELTLSVTHPVVPFLLTVYDHDTFTKDDKMGDAEFDLSPYIEALKMNLEDLPSGTIITRIHPCRQNCLAEDSCITYDDGKIVQNVVLRLRHVECGEVELQLQWIDLPGAKGFILIN 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi410g00038 169 CDD C2_ArfGAP 5 148 - -
Sebi410g00038 169 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Sebi410g00038 169 Gene3D C2 domain 2 163 IPR035892 -
Sebi410g00038 169 SMART C2_3c 7 102 IPR000008 -
Sebi410g00038 169 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 91 IPR035892 -
Sebi410g00038 169 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 163 IPR044562 -
Sebi410g00038 169 Pfam C2 domain 6 92 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi410g00038 Sebi-Chr410 415367 416278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi410g00038 38 165 C2H2 Transcription Factor Family AT1G70790 57.692 8.64e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi410g00038 - - gmx:100799469 286.189