Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi410g00036 ATGTGGATGGTGGGTTACAATGAAGGTGGTGAGTTCAACTGCAACAACATGGCTGATTATCCATTCAATGGAAGGAAACTCAGGCCTCTGATGCCAAGGCCAGTGACTACTTCTCCTAACAACACTTCAGCTACAAACACTCCTTGCTTGAACCGCATTCATGGCAACGATTTCTTTTCACAATATCACAACCTGGCAGCATCAGTGGCAGAGCAGAACAAGAGAGAGTTCAATACTCCACCAGTTGTGGTGAGCTCAAGGTGGAATCCAACCCCAGAACAGCTAAGAGCACTGGAAGAATTGTATAGGAGAGGAACAAGAACACCATCTGCGGAACAAATCCAGCAAATCACTGCACAGCTTAGAAGATATGGAAAAATTGAAGGGAAGAATGCGCAAGTAGGGACAGTGTTTGAAGTTGAACAGACCAAGAACTGGGCACCCTCTACAAACTGCAGTACTCTTGCAGAGGAATCTGTTTCAATTCAAAGGGCAGCAAAAGCAGCAATTGCAGAGTGTAGAACAGATGGATGGCTCCAATTCGATGAAGGAGAATTACAGCAAAGAAGAAACTTTATGGAAAGGAATGCCACGTGGCATATGATGCAGTTATCTTGTCCTCACCCTCCTACAGTTACCCCACACCACCACCTCATAAACACACCTCCTAATAACAGTAACACCTCTACAACTAGCATGGCCTCCACAACCACAGTAGCAGCTACAGTAATGGACCCAAAACTCATTAAGACCCATGATCTCAGCTTCTTCTCATTTCACCTCACACTCACAGACAAAATGGTATTGTCCACTTAA 816 0.4485 MWMVGYNEGGEFNCNNMADYPFNGRKLRPLMPRPVTTSPNNTSATNTPCLNRIHGNDFFSQYHNLAASVAEQNKREFNTPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRYGKIEGKNAQVGTVFEVEQTKNWAPSTNCSTLAEESVSIQRAAKAAIAECRTDGWLQFDEGELQQRRNFMERNATWHMMQLSCPHPPTVTPHHHLINTPPNNSNTSTTSMASTTTVAATVMDPKLIKTHDLSFFSFHLTLTDKMVLST 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi410g00036 271 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 72 131 IPR044555 GO:0003700|GO:0099402
Sebi410g00036 271 SUPERFAMILY Homeodomain-like 86 146 IPR009057 -
Sebi410g00036 271 CDD homeodomain 87 121 IPR001356 GO:0003677
Sebi410g00036 271 Pfam Homeodomain 86 131 IPR001356 GO:0003677
Sebi410g00036 271 Gene3D - 85 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi410g00036 Sebi-Chr410 395087 396998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi410g00036 1 204 Wox Gene Family AT3G18010 41.732 2.06e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sebi410g00036 Homeodomain 1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi410g00036 - - gmx:100777274 383.645