Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi40g00108 ATGGCGCCGCTAACGTCCGTTATATTGGGAAGTATGCTGGTTTATGTCACTCACGCCGAGAAGCACGGCGTTCAAGTGATTGGAGACTTGAAGAAGGGGCTAAATCCACCTTCGGTGACGGATTTGGTGTTTGTGTCGCCTTATATGGGCACAGCTATCAAAACTGGATTTGTTACAGGCATTATAGCGTTGGCTGAAGGAATAGCAGTCGGAAGAAGCTTTGCCATGTTTAAGAACTACCATATTGATGGCAATAAAGAGATGATAGCTATTGGGACCATGAATATTTTTGGTTCCTTCACCTCTTGCTACCTCACAACAGGACCATTTTCACGCTCAGCTGTGAACTACAATGCTGGATGCAAGACTGCAGCATCAAACATTGTAATGTCAATTGCAGTGATGTTGACATTGTTATTCCTAACACCCTTGTTCTATTACACTCCCCTGGTGGTGCTATCAGCCATAATTGTATCTGCAATGCTTGGTCTCCTAGATTATCAAGCAGCCATCCATTTGTGGAAAATTGACAAATTTGATTTCTTAGTGTGCTTCAGTGCATATATTGGAGTAGTCTTTGGCAGTGTTGAAATTGGCTTAGTAATAGCAGTTGCAATATCTGTACTTCGAGTGCTTCTATTTATTGCAAGGCCAAGGACATTTCTCTTAGGCAACATTCCAAATTCTGTAGTATACAGAAATGTAGAACAATATCCAAATGCACACCATGTTCCTGGAATCCTAATTCTTGAAATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAGAGGATTACAAGGTGGATTGATGAAGAGGAAGATAGAATTAAAGCTACAGGGAAAACCAGTTTAGAGTATGTTATAATGGATATGACTGCTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGTTTAAGAAGACTGTTGACAGAAGAGGGCTACAACTCGTTTTGGTCAATCCTGTAAGCGAGGTGATGAAGAAGCTGAACAAATCAAACTTCCTTGATGAATTAGGACATAAATGGATCTATCTGACAGTTGAAGAGGCTGTTGGGGTATGCAACTTCATGCTCCGTACACAAAAACCGAACCCCATGAAAGATGAATCAGAAGGTTGGAACAGTGTGTAA 1149 0.4082 MAPLTSVILGSMLVYVTHAEKHGVQVIGDLKKGLNPPSVTDLVFVSPYMGTAIKTGFVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFYYTPLVVLSAIIVSAMLGLLDYQAAIHLWKIDKFDFLVCFSAYIGVVFGSVEIGLVIAVAISVLRVLLFIARPRTFLLGNIPNSVVYRNVEQYPNAHHVPGILILEIDAPIYFANASYLRERITRWIDEEEDRIKATGKTSLEYVIMDMTAVGNIDTSGISMLEEFKKTVDRRGLQLVLVNPVSEVMKKLNKSNFLDELGHKWIYLTVEEAVGVCNFMLRTQKPNPMKDESEGWNSV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi40g00108 382 FunFam Sulfate transporter 31 217 363 - -
Sebi40g00108 382 ProSiteProfiles STAS domain profile. 237 360 IPR002645 -
Sebi40g00108 382 SUPERFAMILY SpoIIaa-like 239 360 IPR036513 -
Sebi40g00108 382 Pfam Sulfate permease family 1 186 IPR011547 GO:0016020
Sebi40g00108 382 CDD STAS_SulP_like_sulfate_transporter 238 353 - -
Sebi40g00108 382 Gene3D STAS domain 217 362 IPR036513 -
Sebi40g00108 382 PANTHER SULFATE TRANSPORTER 2 363 IPR001902 GO:0016020|GO:0055085
Sebi40g00108 382 Pfam STAS domain 238 356 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi40g00108 Sebi-Chr40 2198301 2202287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi40g00108 1 370 Inorganic Solute Cotransporters AT4G02700 66.757 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi40g00108 K17471 - gmx:100804670 697.967