Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi40g00001 ATGGCCATTGTATTGGCCAATGGAGGGGGCAAGCCACCGGATTGGCAAGATTTCACTGGTATTGTTGTGTTGCTTATTATCAACTCAACCATCAGTTTCATTGAGGAAAACAATGCAGGCAATGCTGCAGCTGCTTTGATGGCTGGTCTTGCACCCAAAACCAAGGTTCTGAGGGATGGAAAATGGAGTGAGCAAGAGGCATCAATTTTGGCACCAGGAGATGTGATTAGCATCAAGTTGGGAGACATTGTCCCTGTTGATGCCCGTCTCTTGGAGGGTGATCCTCTCAAGATTGACCAATCTGCCCTCACTGGTGAGTCCTTGCCAGTCACAAGGCACCCTGGTAGTGAGGTCTTCTCTGGTTCCACTTGCAAACAAGAGATTGAGGCAGTTGTCATTGCCACTGGTGTCCACACCTTCTTTGGTGTTGACATCCATTGGGCTTACAAGATGTATGACAATTTGTTGGTGCTTCTCATTGGAGGTATTCCAATTGCCATGCCAACTGTCTTGTCTGTGACCATGGCTATTGGATCTCACCGCCTAGCTTCTAGGACTGAAAACCAAGATGCCATTGATGCATCAATTGTGGGAATGTTGGGTGACCCCAAGGAGGCAAGAGCAGGAATCACTGAGGTGCATTTCTTGCCCTTCAATCCTGTGGACAAGCGCACAACTATTACCTACATTGATAGCAATGGTGAATGGCACAGAAGCAGCAAAGGTGCTCCTAAGCAAATCATTGAGCTTTGTGCCTTCAAGGGAGAGACTTTGAAAAGGCCCACAATCCATAGGGAGGTTCAGTGGCATTAA 813 0.476 MAIVLANGGGKPPDWQDFTGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEASILAPGDVISIKLGDIVPVDARLLEGDPLKIDQSALTGESLPVTRHPGSEVFSGSTCKQEIEAVVIATGVHTFFGVDIHWAYKMYDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLASRTENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTTITYIDSNGEWHRSSKGAPKQIIELCAFKGETLKRPTIHREVQWH 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi40g00001 270 Gene3D - 184 257 IPR023299 GO:0000166
Sebi40g00001 270 Gene3D - 14 143 - -
Sebi40g00001 270 PANTHER CALCIUM-TRANSPORTING ATPASE 183 254 - -
Sebi40g00001 270 Gene3D - 151 183 - -
Sebi40g00001 270 FunFam Plasma membrane ATPase 52 135 - -
Sebi40g00001 270 SUPERFAMILY Calcium ATPase, transduction domain A 52 142 IPR008250 -
Sebi40g00001 270 SUPERFAMILY Calcium ATPase, transmembrane domain M 6 185 IPR023298 -
Sebi40g00001 270 Gene3D - 52 135 - -
Sebi40g00001 270 Pfam E1-E2 ATPase 51 142 - -
Sebi40g00001 270 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 182 253 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi40g00001 Sebi-Chr40 57121 58680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi40g00001 1 260 Primary Pumps ATPases AT3G42640 60.714 3.11e-120 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi40g00001 K01535 - csav:115724825 373.629