Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi409g00059 ATGGATGTTCAAGTGATAAACGTGGAAGAAGGAAGTGGTCATGAAGATAAGGCAGATGATGGGGATGCAGAACCTAGTGACGGTGAAATTAATAATGCTGAGAACCCTGGATCTCATGTTGAGGATGGGATTTCTGAGCCATATGTGGGTATGGAATTTGATTCCGAAGAAGTTGCTAAGACTTTCTATGATGAGTATGCTAGACGCATGGGTTTCAGCTCTAAAATTGGCCCACGTAATCGCTCTAAAGCTGATGGGTCAAATATGTATCGGGAGTTTGTGTGTGGTAAGGAAGGTTTGAAAAAAAAGTTTAATGATACTTGTGATGCAATGATTAGGATTGAGCTAAAGAGTCAAAATAAATGGGTTGTAACAAAATTTGTGAAGGAGCATAGTCATTCCCTGGTGAGTTCCAATAAAGCAAACAACCTTCGGCCACGTAAGCATTTTTCCAGTGTTGGAAGGACAATGCCTGAAACTTATCAAGGAGTTGGACTTGTTCCTAGTGGTGTCATGCATGTCTTAACTGTTTTCACTGTAACAAATGTACTTACTTTACCATCCCATTACATCTTAAAACGGTGGACACGAAATGCAAAAGGTAGTGCTGGATTGGATGAACGTGGTGGTGAATCACATGGACAGGAATCTCTGTCATCAAGGTATAGTAGTCTATGCAGGGAAGCTATCAGATATGCTGAGGAAGGGGCAGTAAGTGTGGAAACTTATAATGCTGCAATGAGTGGTCTTAGAGAAGGTGGAAAGAAGGTTTCCGCTTTGAAAAGAAGTGTTGCCAAAGTTACACCTCCTAATAATCAAGTCAGTGGGACTGCTTATGATGACAGGAAAACTACTACTTCTACTTTGGATACAACTCCTCTTTTGTGGCCCCGGCAAGATGAATTAACAAGGAGGTTTAATCTTAACGATGCTGGAGGTACTGTTCAATCAGTTGCTGATCTAAATTTGCCACGAATGGCTCCAGTGTCTCTTCATCGAGATGATAGTCCATCTGAAAACATGGTGGTTCTTCCATGCCTAAAATCAATGACATGGGTAATGGAGAACAAAAATTCAAGTCCAGGGAATAGAGTAGCTGTTATCAATCTGAAGTTGCAAGATTATAGCAGGACTCCGTCAACAGAATCTGAGGTTAAGTTTCAGCTCTCAAGAGTTTCTTTGGAACCAATGTTGAAGTCTATGGCCTACATCAGTGAACAGCTCTCAACACCAGCTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAGGATACTGAGACAACTACTGGTGAGTCTGAAGTGAAGTTTCAGGTGTCCAGGGATACGTTGGGTGCCATGCTACGGTCAATGGCTTATATCCGTGAGCAACTATCTTCTGCTGTAACTGGCGATGCACAGTCAGAACCTCTATTGAAAAAGCATAGGAAGGACTCAGCCCGAATCGTAGCTTATGTGAATGTAGCCTATCATGAACTCATGAGGTCAGATGTCCAAGGAGGACCTCAACCTCAAGTAGGTGGCCGAGCATCTCCAAGTCGTTGGCCGAGCATATCCAGAACATGGTTGAGCCCAGAATAA 1578 0.4246 MDVQVINVEEGSGHEDKADDGDAEPSDGEINNAENPGSHVEDGISEPYVGMEFDSEEVAKTFYDEYARRMGFSSKIGPRNRSKADGSNMYREFVCGKEGLKKKFNDTCDAMIRIELKSQNKWVVTKFVKEHSHSLVSSNKANNLRPRKHFSSVGRTMPETYQGVGLVPSGVMHVLTVFTVTNVLTLPSHYILKRWTRNAKGSAGLDERGGESHGQESLSSRYSSLCREAIRYAEEGAVSVETYNAAMSGLREGGKKVSALKRSVAKVTPPNNQVSGTAYDDRKTTTSTLDTTPLLWPRQDELTRRFNLNDAGGTVQSVADLNLPRMAPVSLHRDDSPSENMVVLPCLKSMTWVMENKNSSPGNRVAVINLKLQDYSRTPSTESEVKFQLSRVSLEPMLKSMAYISEQLSTPANKVAVINLKLQDTETTTGESEVKFQVSRDTLGAMLRSMAYIREQLSSAVTGDAQSEPLLKKHRKDSARIVAYVNVAYHELMRSDVQGGPQPQVGGRASPSRWPSISRTWLSPE 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi409g00059 525 MobiDBLite consensus disorder prediction 263 287 - -
Sebi409g00059 525 MobiDBLite consensus disorder prediction 265 287 - -
Sebi409g00059 525 Pfam FAR1 DNA-binding domain 61 136 IPR004330 -
Sebi409g00059 525 MobiDBLite consensus disorder prediction 495 525 - -
Sebi409g00059 525 PANTHER COMM DOMAIN-CONTAINING PROTEIN 9 410 462 IPR037360 -
Sebi409g00059 525 MobiDBLite consensus disorder prediction 1 41 - -
Sebi409g00059 525 MobiDBLite consensus disorder prediction 509 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi409g00059 Sebi-Chr409 862327 870103 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi409g00059 FAR1 4.6e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi409g00059 - - gmx:100786516 506.138