Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi409g00046 ATGGAACATAAAGTAGCAACAGCAAGTGAAGGACAACCTATCAGATGTAAAGCGGCGGTTGCAAGAAGAGCCGGTGAGCCATTGGTGATGGAAGAGATCATTGTGGCGCCACCAATGCCTCGTGAGGATCCTCCTGGCTTTTTTCCGAGAATTCTGGGACATGAGGCGGTTGGGGTAGTGGAAAGTGTAGGGAAGGATGTGACTGAAGTTACAAAAGGAGATGTGGTTATTCCAATTTTCCTACCAGATTGTGGGGAGTGTGTAGATTGCAAATCAACCAAGAGCAACCGTTGTACTAATTTCCCTTTCAAGGTGTCTCCTTGGATGCCTAGATATGGTGGTACCACTAGATTCACTGACCTAAATGGAGAGATCATATACCATTTCATGTTTGTTTCAAGTTTCAGTGAGTACACTGTGGTTGACATTGCCAATGTAACAAAGATTGACCCGGAAATTCCTCCTGACAGGGCATGTCTTCTCAGTTGTGGTGTATCAACAGGGGTAGGCGCTGCTTGGAGAACAGCAGATGTGGAGCCAGGGTCTACAGTAGCTATTTTTGGGCTGGGATCTGTTGGATTAGCAGTTGCAGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATAGGTGTGGATGTCAACCCAGAAAAATTTGAAATTGGGAAAAAGTTTGGACTCACAGACTTTGTCCATGCTGGAGATTGTGGGAACAAACCTATAAGCCAGGTTATAATAGAGATAACTGGTGGGGGAGCAGATTATTGCTTTGAATGTGTTGGTATGGCATCACTGGTACATGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAACAATTGTTTTAGGAGTGGACAAGCCAGGAGCCAGGTTGAGCCTCAGTTCTAGTGAGGTCCTTCATAATGGGAAGACCCTCATGGGATCCGTATTTGGAGGACTCAAACCCAAGTCTCATGTACCCATTCTCCTTAAACGCTACATGGACAAGGAACTACAGTTGGATGAATTTGTCACTCATGAGGTGGAGTTTAAGAACATCAATAAAGCTTTTGATTTATTGAGTCAAGGACAGTGTCTGCGGTGCTATTCTGCTGCACTGCAAATGCACTTGAAGAACCAGCAAAGGAGATCCAGCTTTTGTTCTTCACTTACTTGTTGCTTCACCATGGAACATAAACAAGTAGCAGCAACAACTGAAGGACAACCTATAAGATGTAAAGCGGCGGTTGCAAGAAGAGCCGGTGAACCATTGGTGATTGAGGAGATCATTGTGGCGCCACCAATGCCTCGTGAGATTCGGATTCGTATTATATGTACCTCCCTCTGCCACGTCGATATCACTTTTTGGAAGATGCAGGACCCTCCTGGCTTTTTCCCAAGAATTCTTGGTCATGAGTCAATCGGGATAGTGGAAAGTGTAGGGAAGGATGTAACTGAAATTACAAAAGGTGATGTGGTTATTCCAATTTTCCTACCAGATTGTGGGGAGTGTGTAGACTGCAAATCAACCAGGAGCAACCTTTGTTCTAATTTCCCTTTCGAGGCATCTCCGTGGTTGCCTAGACATGGTACCACTAGATTCACTGACCTAAATGGGGAGAGCATATACCATTTCATGTTTGTTTCAAGTTTCAGCGAGTACACTGTGGTGGACATTGCCAATGTAACAAAGATTGACCTAGAAATTCCTCCTAACAGAGCATGCCTGCTCACTTGTGGTATAGCAGCAGGGATAGGTGCTGCTTGGAGAACAGCAAGTGTGGAGCCAGGGTCTTCAGTAGCTATTTTTGGGCTGGGATCTATTGGATTAGCGGTTGCTGAGGGAGCCAGACTTTGTGGCGCAACTAGGATTATAGGTGTAGATGTCAACCCAGAAAAATTTGAAATTGGAAAAAAGTTTGGAGTCACAGACTTCGTCCATGCTGGAGAATGTGGAAACAAACCTGTGAGCCAGGTTATCATAGAGATAACTGGTGGGGGAGCAGATTATTGCTTTGAATGCGTTGGTATGGCATCAATGGTCCATGAAGCATATGCTTCTTGTCGAAAGGGTTGGGGAAAAACTATTGTTTTAGGAAAGGACAAGCCAGGATCCAGTTTGAGCCTTAGTTCTAGTGAGGTCCTTCATGATGGAAAGACCCTCAAGGGAACCTTATTTGGAGGACTCAAACCTAAGTCTCATGTATCCTCTCTTCTCAAACGTTACATGGACAAGCACCCTCTATAA 2226 0.4483 MEHKVATASEGQPIRCKAAVARRAGEPLVMEEIIVAPPMPREDPPGFFPRILGHEAVGVVESVGKDVTEVTKGDVVIPIFLPDCGECVDCKSTKSNRCTNFPFKVSPWMPRYGGTTRFTDLNGEIIYHFMFVSSFSEYTVVDIANVTKIDPEIPPDRACLLSCGVSTGVGAAWRTADVEPGSTVAIFGLGSVGLAVAEGARLCGATRIIGVDVNPEKFEIGKKFGLTDFVHAGDCGNKPISQVIIEITGGGADYCFECVGMASLVHEAYASCRKGWGKTIVLGVDKPGARLSLSSSEVLHNGKTLMGSVFGGLKPKSHVPILLKRYMDKELQLDEFVTHEVEFKNINKAFDLLSQGQCLRCYSAALQMHLKNQQRRSSFCSSLTCCFTMEHKQVAATTEGQPIRCKAAVARRAGEPLVIEEIIVAPPMPREIRIRIICTSLCHVDITFWKMQDPPGFFPRILGHESIGIVESVGKDVTEITKGDVVIPIFLPDCGECVDCKSTRSNLCSNFPFEASPWLPRHGTTRFTDLNGESIYHFMFVSSFSEYTVVDIANVTKIDLEIPPNRACLLTCGIAAGIGAAWRTASVEPGSSVAIFGLGSIGLAVAEGARLCGATRIIGVDVNPEKFEIGKKFGVTDFVHAGECGNKPVSQVIIEITGGGADYCFECVGMASMVHEAYASCRKGWGKTIVLGKDKPGSSLSLSSSEVLHDGKTLKGTLFGGLKPKSHVSSLLKRYMDKHPL 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi409g00046 741 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 53 67 IPR002328 GO:0008270|GO:0016491
Sebi409g00046 741 FunFam Alcohol dehydrogenase 6 408 589 - -
Sebi409g00046 741 Pfam Alcohol dehydrogenase GroES-like domain 44 148 IPR013154 -
Sebi409g00046 741 Pfam Alcohol dehydrogenase GroES-like domain 430 557 IPR013154 -
Sebi409g00046 741 FunFam S-(hydroxymethyl)glutathione dehydrogenase 577 717 - -
Sebi409g00046 741 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 562 737 IPR036291 -
Sebi409g00046 741 SUPERFAMILY GroES-like 9 177 IPR011032 -
Sebi409g00046 741 PANTHER ALCOHOL DEHYDROGENASE 11 361 - -
Sebi409g00046 741 Gene3D - 577 717 - -
Sebi409g00046 741 Gene3D - 168 308 - -
Sebi409g00046 741 SUPERFAMILY GroES-like 316 361 IPR011032 -
Sebi409g00046 741 SUPERFAMILY GroES-like 398 584 IPR011032 -
Sebi409g00046 741 Gene3D - 408 738 - -
Sebi409g00046 741 Gene3D - 42 360 - -
Sebi409g00046 741 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 463 477 IPR002328 GO:0008270|GO:0016491
Sebi409g00046 741 FunFam Alcohol dehydrogenase 6 39 180 - -
Sebi409g00046 741 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 328 IPR036291 -
Sebi409g00046 741 Pfam Zinc-binding dehydrogenase 192 312 IPR013149 -
Sebi409g00046 741 Pfam Zinc-binding dehydrogenase 601 721 IPR013149 -
Sebi409g00046 741 FunFam S-(hydroxymethyl)glutathione dehydrogenase 168 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi409g00046 Sebi-Chr409 756233 765219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi409g00046 430 572 Monolignol Biosynthesis Gene Families AT4G39330 25.000 2.03e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi409g00046 K00121 - gmx:100817521 644.81