Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi409g00035 ATGGTGGATGTGATGCATGAATCTGCTGTTGTTTCAGACATGTTAACTGATGAAGACACTGTTATGGAGATAACTTGGCATTTTGATTGTCCCGAAAATAGTTCTGATAATGGTCATAGTAGTGATACTGATGGTGAGACAGATGAGTCAAATAATGAAAATGGTGAAGGGTTGAATGGTAACAGTACTAATGAAGAACATGTAGATTTATTCAAGATTGAATCGGTTGTCGATTTGGAGCAAATTGAATTCAACAATTTAACAGCTACTGAGGTTCAGTTGTACCATTTTAGTACTAGACAAGTGGCTTTTGAATTCTATAGAAAGTATGCAGAGAAAAATGGTTTTGCTGCTAGGAAATGGAATACTGTGAGAAACAAGAAAGGTGACGTTACTCAGCAGACATATGTGTGTTTTAAGGAGGGCTTTCGGCTGAAGAAGCATTTGAAAAGAAAAAACCGAAAGAGGGAGGCAAGACCAATGACACGATGTGGTTGTAAAGCTTTCTTCCGTGTCTTTATTGATGTAGACACGGGTCGTTGGCATGTAAAAGCCTTTTCAGATGAACATAGTCATGAATTGTTGGCGGAGAAATTTGTTGGGATGCTACCTGCACACAGGAAGATGCATGACTGTGACATCAATCAAATGAATAGCATGAGAGATGCAGGTATAAGTGTGTCACAGATATATGGACTAGCTGCCAACCAATGTGGTGGGTATGACAGGTTGGCATTTAGGAAACAGGACATGTATAATGAAATTGTAAGACAAAGGCGGATGAAGGGTAATGAGTGGGCAAGGGAATTATACGAAAAGAGGAAAATGTGGGCGACAGCTCACATCCGAGGTAATTTTTTTCTTGGATTCTGTACAACTTCCAGGTGTGAGGGGATGCATTCACAGGTTGCCAGACAGAGGGAGTTGGAGGCAGATTTTGAGTCCATTGTGGGTGAGCCTATTTTGGTTTCCCAATTTGAAGACATTGAGAGATGTGGAGCGAATATCTACACAAGGAAAATTTTTCATATGTTTAGGAGGTCATTTCCAAACCATCAGTGGTATGTTTCTTTGGTACTTCCAGTGCTTGACCTAAAGTGCTCTTGTTTAAGGATGGAGTCATTGGGGATTCCATGTGAGCATATAATTTGCTTGTTGAATTATTTGGAGATAAGGGAGTTGCCTGACTCTCTTATAGTTCGAAGGTGGACTAAGAATGCTAAACATCCGTTTGATGGTAATGGTGTTGTTGGTGCTGGACGGTCAGATTTATCTAAGCAATATGTTAAGGAGTTGTTGAACAAATTAAGGGAATCTGCCCAACAAACAAATATGGAGCAAGCCAATCATAGTGATGATGATGATGTCAGTGTGAGGGATCCAGCCCGTGTGAGGACAAAAGGGTGTGGAAATAGGAACAATGCAGGTTGTAGTGGCAGAGGCAATAGAAGGACCACTTGTTGTAGTATTTGCCAAGCTCCCGGTCACAACAAGAAAAAATGCCCTCTTAGAAGGGTTAATGATGCTGGTGGCACATCAACTAATCATGAGAATGTCTAG 1560 0.4077 MVDVMHESAVVSDMLTDEDTVMEITWHFDCPENSSDNGHSSDTDGETDESNNENGEGLNGNSTNEEHVDLFKIESVVDLEQIEFNNLTATEVQLYHFSTRQVAFEFYRKYAEKNGFAARKWNTVRNKKGDVTQQTYVCFKEGFRLKKHLKRKNRKREARPMTRCGCKAFFRVFIDVDTGRWHVKAFSDEHSHELLAEKFVGMLPAHRKMHDCDINQMNSMRDAGISVSQIYGLAANQCGGYDRLAFRKQDMYNEIVRQRRMKGNEWARELYEKRKMWATAHIRGNFFLGFCTTSRCEGMHSQVARQRELEADFESIVGEPILVSQFEDIERCGANIYTRKIFHMFRRSFPNHQWYVSLVLPVLDLKCSCLRMESLGIPCEHIICLLNYLEIRELPDSLIVRRWTKNAKHPFDGNGVVGAGRSDLSKQYVKELLNKLRESAQQTNMEQANHSDDDDVSVRDPARVRTKGCGNRNNAGCSGRGNRRTTCCSICQAPGHNKKKCPLRRVNDAGGTSTNHENV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi409g00035 519 MobiDBLite consensus disorder prediction 29 64 - -
Sebi409g00035 519 MobiDBLite consensus disorder prediction 448 465 - -
Sebi409g00035 519 Pfam SWIM zinc finger 363 388 IPR007527 GO:0008270
Sebi409g00035 519 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 252 437 IPR031052 GO:0006355
Sebi409g00035 519 Pfam FAR1 DNA-binding domain 105 195 IPR004330 -
Sebi409g00035 519 MobiDBLite consensus disorder prediction 441 465 - -
Sebi409g00035 519 SMART 26again6 365 392 IPR006564 GO:0008270
Sebi409g00035 519 ProSiteProfiles Zinc finger SWIM-type profile. 354 390 IPR007527 GO:0008270
Sebi409g00035 519 MobiDBLite consensus disorder prediction 499 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi409g00035 Sebi-Chr409 577435 579932 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi409g00035 FAR1 2.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi409g00035 - - adu:127745482 206.068