Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi409g00027 ATGGGTTCTCAAGGTAATGGGCAACAGTCTCATTTACAACATTCTCCATTGTCTAGGCAAAGCTCTTGGTATAATCTCACCCTTGATGAGGTTAAGAGTCAATTAGGAGACATGGGGAAGCCATTAGGGAGCATGAACCTTGATGAGCTTCTTCAGAATGTGTGGACTGCTGAAGCAAATAAGCCTGTGCTAGGCATGGACAATGATGAAAACATGTCATCATCATCTTCCCTTCAACGCCAGGCCAGTCTCACATTGGCCCGTGCTTTGAGTGGGAAGACAGTTGATGATGTGTGGAGAGAGATTCAACAAGGTCAGAAGAAAAGGTATGGAGAGGGTGTGAAGAGCCATCAGGATAGAGAAATGAGTCTTGGTGAAACAACCTTAGAGGATTTCTTGGTGCAGGCAGGGCTTTTTGCTGAAGCTTCTATCAGTCCAGCTGTGGGGTATGATACAATGGAGTCCCCCACTCCCCAAAGTTTTCAACACAAAACAGGATTTACATCCTCCCCTTCAATTGGCAGCTTGTCGGACACAAGACCGGGCCGGAAAAGGGACTGTCCTGATGCATATGAGAAAACTCTGGAGAGGAGGCTGAAGAGGAAAATCAAGAATAGGGAATCAGCTGCTCGATCACGGGCCCGAAAACAGGCTTACCATAATGAACTGGTTGGCAAGGTTTCCCGTCTAGAAGAAGAAAATATAAAGCTCAAGAAAGAGAAGCACCTTAAGCTTTAA 738 0.4593 MGSQGNGQQSHLQHSPLSRQSSWYNLTLDEVKSQLGDMGKPLGSMNLDELLQNVWTAEANKPVLGMDNDENMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGEGVKSHQDREMSLGETTLEDFLVQAGLFAEASISPAVGYDTMESPTPQSFQHKTGFTSSPSIGSLSDTRPGRKRDCPDAYEKTLERRLKRKIKNRESAARSRARKQAYHNELVGKVSRLEEENIKLKKEKHLKL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi409g00027 245 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 200 215 IPR004827 GO:0003700|GO:0006355
Sebi409g00027 245 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 195 245 - -
Sebi409g00027 245 Pfam bZIP transcription factor 197 240 IPR004827 GO:0003700|GO:0006355
Sebi409g00027 245 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 17 240 IPR043452 GO:0003700|GO:0045893
Sebi409g00027 245 Coils Coil 220 240 - -
Sebi409g00027 245 Gene3D - 195 245 - -
Sebi409g00027 245 MobiDBLite consensus disorder prediction 156 188 - -
Sebi409g00027 245 MobiDBLite consensus disorder prediction 156 177 - -
Sebi409g00027 245 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 195 240 IPR004827 GO:0003700|GO:0006355
Sebi409g00027 245 SMART brlzneu 193 244 IPR004827 GO:0003700|GO:0006355
Sebi409g00027 245 SUPERFAMILY Leucine zipper domain 197 241 IPR046347 GO:0003700|GO:0006355
Sebi409g00027 245 CDD bZIP_plant_BZIP46 197 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi409g00027 Sebi-Chr409 475479 477203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi409g00027 17 244 bZIP Transcription Factor Family AT3G56850 46.008 8.14e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi409g00027 bZIP_1 3.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi409g00027 K14432 - gmx:100798549 372.859