Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi409g00021 ATGGGAAATTCCTGTGCAAAACCAGTTGCTCATGTGTCTTCCTCTAATATTGGTGGAAGTAAGAAGCCTCAAAGCAGGTCTCAAAGCAGGCCTCAAAGCAAGCCTCAAAGCAAGCCTCATAGCAAGCCCCAAAGCAAGCCAAAGCAGTATTCAAATTCTTCTCAACAAAAATCTACTTTGCATCCTTCAAGATTAAATGTTGACCAACCCATTTCCAATAAACTCAAGTCCTTCAGCTTGAATGATCTAAAGGAGGCCACTAAGAACTTCCGGCAAGAAAATTTAATTGGAGAGGGAGGATTTGGGCGTATCTTCAAGGGATGGATTGATGAGAACACATTTGCTCCCACAAAACCAGGGAGTGGGATAGTAGTGGCCATTAAGAGTCTTAAACCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCAGAAATCAATTATCTAGGACAGCTTCACCATGAAAATCTGGTGAAACTTATTGGTTATTGCTTGGAAGGTAAAAACAGGCTTCTAGTCTATGAGTATATGCCAAAAGGAAGCTTGGAGAATCATTTATTCAGGAGTCATTTGACACCAAGGAGTGATGTATACAGCTTTGGTGTTGTCTTGTTAGAGTTACTAACAGGAAGGCGTGCAGTAGAAGATGATAGACCAGGATTTTCAGAAGAAACACTAGTGGATTGGGCAAAGCCCTTTCTTAGTGATAACAGAAGAGTTTTGAGAATCATGGACACTAGGTTGGGTGGACAATACTCCAAGAAAGGAGCACAGGCTGCAGCTGCACTTGCATTGCAATGCCTTAACTCAGACCCCAAATTTAGACCACCTATGGCAGATGTTCTAGCAGCATTGGAAGGACTTCATTCCTTAAATACAATTCCAAGGACACCAAAATCTGGAACTGAGAGTCATGCAACAAAGCATTCTGGCTATTCACAAAAGTAA 945 0.419 MGNSCAKPVAHVSSSNIGGSKKPQSRSQSRPQSKPQSKPHSKPQSKPKQYSNSSQQKSTLHPSRLNVDQPISNKLKSFSLNDLKEATKNFRQENLIGEGGFGRIFKGWIDENTFAPTKPGSGIVVAIKSLKPESFQGHKEWLAEINYLGQLHHENLVKLIGYCLEGKNRLLVYEYMPKGSLENHLFRSHLTPRSDVYSFGVVLLELLTGRRAVEDDRPGFSEETLVDWAKPFLSDNRRVLRIMDTRLGGQYSKKGAQAAAALALQCLNSDPKFRPPMADVLAALEGLHSLNTIPRTPKSGTESHATKHSGYSQK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi409g00021 314 MobiDBLite consensus disorder prediction 8 68 - -
Sebi409g00021 314 SUPERFAMILY Protein kinase-like (PK-like) 73 296 IPR011009 -
Sebi409g00021 314 ProSiteProfiles Protein kinase domain profile. 90 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi409g00021 314 Gene3D Transferase(Phosphotransferase) domain 1 185 313 - -
Sebi409g00021 314 MobiDBLite consensus disorder prediction 291 314 - -
Sebi409g00021 314 MobiDBLite consensus disorder prediction 1 68 - -
Sebi409g00021 314 ProSitePatterns Protein kinases ATP-binding region signature. 96 128 IPR017441 GO:0005524
Sebi409g00021 314 MobiDBLite consensus disorder prediction 292 314 - -
Sebi409g00021 314 FunFam Serine/threonine-protein kinase BIK1 56 175 - -
Sebi409g00021 314 PANTHER OS01G0588500 PROTEIN-RELATED 45 187 - -
Sebi409g00021 314 Pfam Protein tyrosine and serine/threonine kinase 93 187 IPR001245 GO:0004672|GO:0006468
Sebi409g00021 314 Gene3D Phosphorylase Kinase; domain 1 65 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi409g00021 Sebi-Chr409 415169 417778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi409g00021 189 284 Glycoside Hydrolase AT3G07070 45.833 7.03e-20 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi409g00021 PK_Tyr_Ser-Thr 3.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi409g00021 - - zof:122042406 261.151