Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi409g00015 ATGGCTACTCCACAGAATAGGTTGAACAAGAACGTTCCTGCTGCATCATCGCAAGATAGCTGTGAAGGTAGTGCCGCCATTGAACATCCTCCTCCTCCTGCTGCCGCCAAAATTAGGGTTTGTCCACACTGTAAACGAGAATTCATCAATGGAAGAGCCTTTGGAGGACACGTCAGAATCCATTCCAAAGGAGGAACGAAGATCAGATTCACCCATAAAAAAAGCAGCAGCAGTGGAGCAGCAACAACAACCACAATCCAACGAGCTGGTGAAGGTGCAGTTAGTGATGATGATGATCTGTCAGTGTCCATAAATGGACGTGGTTGGCATGCTGCTCGCAGAATGAGGGCACTCATTCATAATTCTGAATCTGATGATGAGGAGGTCGTTTCAACTTCAAATAAAAGGAACCATTTTGATCTCAACATGCCTCCTAATTAA 441 0.4535 MATPQNRLNKNVPAASSQDSCEGSAAIEHPPPPAAAKIRVCPHCKREFINGRAFGGHVRIHSKGGTKIRFTHKKSSSSGAATTTTIQRAGEGAVSDDDDLSVSINGRGWHAARRMRALIHNSESDDEEVVSTSNKRNHFDLNMPPN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi409g00015 146 MobiDBLite consensus disorder prediction 1 29 - -
Sebi409g00015 146 MobiDBLite consensus disorder prediction 124 146 - -
Sebi409g00015 146 MobiDBLite consensus disorder prediction 1 23 - -
Sebi409g00015 146 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi409g00015 Sebi-Chr409 327160 327600 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi409g00015 34 94 C2H2 Transcription Factor Family AT3G53820 35.484 4.13e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi409g00015 - - ccaj:109809633 54.299