Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi409g00008 ATGGCTGTTACCTTCTCAAATCTCAACAACGACTCAGGCCTCAAATCCCTTGACGACTTCCTCTATGGGAAGGCCTACATTTCTGGGGATCGGTTCACAAAGGATGACATCAAAGTGTATGCTTATGTTTTGGAGAAGCCAGGTGGCACTTTTCCCAATGCTGCCAAGTGGTACGATGTTGTCTCTTCTCATCTTGCTGCAAGCTTCCCTGGCAATGCTCAAGGAGAGGACAAAAAGGCAGCTGAGGAAAGGGAGGCTGCTAAAAAGCCTGCCAAGAAGAAAGAGAGTGGCAAATCTTCTGTTCTGCTCGATGTTAAGCCTTGGGATGATGAGACAGACATGAAGAAGCTGGAAGAGGCAGTTCGCAGCATTGAGATGCCTGGTCTATTGTGGGGAGCATGCAAACTGGTTCCTGTTGGTTATGGGATCAAGAAGTTGCAGATCATGTTAACCATTGTTGATGACCTTGTATCGGTGGACACCCTTATTGAGGAGCATCTCACAGTTGAGCCTTGCAACGAGTATATCCAAAGCTGCGACATTGTTGCATTCAACAAAATTTAA 564 0.4645 MAVTFSNLNNDSGLKSLDDFLYGKAYISGDRFTKDDIKVYAYVLEKPGGTFPNAAKWYDVVSSHLAASFPGNAQGEDKKAAEEREAAKKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGACKLVPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLTVEPCNEYIQSCDIVAFNKI 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi409g00008 187 Pfam EF-1 guanine nucleotide exchange domain 100 187 IPR014038 GO:0003746|GO:0006414
Sebi409g00008 187 CDD EF1B 96 187 IPR014038 GO:0003746|GO:0006414
Sebi409g00008 187 SUPERFAMILY GST C-terminal domain-like 9 66 IPR036282 -
Sebi409g00008 187 Gene3D - 91 187 IPR014717 -
Sebi409g00008 187 MobiDBLite consensus disorder prediction 76 98 - -
Sebi409g00008 187 FunFam Elongation factor 1-beta 1 like 92 187 - -
Sebi409g00008 187 SMART EF1_GNE_2 98 187 IPR014038 GO:0003746|GO:0006414
Sebi409g00008 187 SUPERFAMILY eEF-1beta-like 95 187 IPR036219 -
Sebi409g00008 187 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 176 187 IPR001326 GO:0003746|GO:0005853|GO:0006414
Sebi409g00008 187 MobiDBLite consensus disorder prediction 72 98 - -
Sebi409g00008 187 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi409g00008 Sebi-Chr409 92101 94205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi409g00008 1 187 Eukaryotic Initiation Factors Gene Family AT5G12110 63.158 4.01e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi409g00008 K03232 - gmx:100306132 290.041