Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi408g00053 ATGTTTTCTTCTGCATACCATGGGCTTTTCCTTTTGTTTGCACTTTTGTTAAGTCTCTGTTTTGACATTGCAACCTCTCGATCAAGGATTGAAGTGCTCCCTGGCTTTCAAGGGCCCCTTCCCTTTGAGCTTGAAACTGGGTACGTGGGGTTAGGAGAAACAGAGGATGATCTGCAAGTGTTCTACTACTTCATTAAGTCAGAGAACAATCCAAAGAAAGATCCTCTTTTGCTTTGGTTAAGTGGTGGTCCTGGTTGCTCTTCATTTACGGGTCTCATCTACCAAATCG 289 0.436 MFSSAYHGLFLLFALLLSLCFDIATSRSRIEVLPGFQGPLPFELETGYVGLGETEDDLQVFYYFIKSENNPKKDPLLLWLSGGPGCSSFTGLIYQI 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi408g00053 96 Gene3D alpha/beta hydrolase 23 96 IPR029058 -
Sebi408g00053 96 Pfam Serine carboxypeptidase 34 94 IPR001563 GO:0004185|GO:0006508
Sebi408g00053 96 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 92 IPR001563 GO:0004185|GO:0006508
Sebi408g00053 96 SUPERFAMILY alpha/beta-Hydrolases 32 94 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi408g00053 Sebi-Chr408 968266 968979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi408g00053 24 53 Calmodulin-binding Proteins AT2G22960 63.333 2.17e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi408g00053 K16296 - tpra:123922058 140.584