Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi408g00036 ATGAATCAACACATTCTGGGTTTCACTGGTTCCACAAATGAAGTTCGGTTGAGGAATCAATCTTTACCAATTCTGCAGGGTCAGAGATTTGCTGCTGGACCCAGATTTGAAAATTCCTTCTTTGAGCAAAGTAGGAAATTTGATCATCTTCAGTCTGATCCAATATCTGCTAATACACCTTCATCCTCTACTGTTACCCATGAGGAGCATTCACCAGAGGATTGTGATTTTTCTGATGCAATTTTGAGTTACATCAGTCAGATCCTTATGGAAGAAGACATGGAAGACAAGACATGCATGCTTCAAGATTCTTTAGATCTTCAAGCAGCTGAGAAATCTTTCTATGATGTGCTGGGTAAAAAATACCCACCCTCACCAATACGAAATCCAAGTTTTATCAATCAAAATGATGGGGTAGGAGGTAATAACTTGTCTGTAAATTATGGTAATTGTCCTAGGACTAATGGTGATCTCAGCAGCATTTTTACTACTAATTTTTTGCTCCCAAACTCAGTTGACTTTCCTCAACAAAGTCTTCAAGGCAATAGTATCTTGCAATCAACTTATAGCCCTTCCAATAGTGTAATAAGTAGTGTGGAAGGGCCTGTAGACTCTCCAAACAGTTTTCCTCAGGTCCCTGATTTGAGCAGTGAGAGTCAATCCATTTGGCAATTTCAGAAGGGTGTTGAGGAGGCTAGTAAGTTTCTTCCTAGTGGAAATGGGCTATTTCCTAATTTGCCAGCACTAGAGCCAAAAGTGGGAATTGATGATTTGTCAGTTAAGGTGGAGAAGGATGAGGAGGAATGTGTTCTTGGTGGTTCCACTGGAAGGAAGCATCCTCTCAGGGAAGAGGGAGATGTTGAAGAAAATAGAAGCAGCAAGCAAGCAGCAATTTATTCTGAACCAACATTGCGGTCAGATATGGTTGATATAATCCTGCTTCATAGTGCAGGGGATGGTAAGGACCATTATGTGGCTAGACGTGAGGCTTTGCAGAATAAGACAAACAAGACAACATTATCAAGTAGTCAATCAAAAGCTTCCAGTAATGGGAAGGGACGTGGTAAGAAACAAAGAGGGAAAAAGGAAGTGATTGATTTGAGAACACTTCTGGTCCTTTGTGCACAAGCTGTTGCTGCAGATGACAATAGGAATGCACATGAGTTGCTAAAGCAGATCAGGCAACACTCAAATCCTTTTGGGGATGGAAATCAGAGGCTGGCTCATATCTTTGCAGATGGTCTTGAGGCACGCTTGGCTGGTACTGGAAGCCAAATCTATAAAGGACTTGTTAGTAAAAGAAGATCAGCTGCTGATATTCTAAAAGCTTATCATCTATACCTTGCTGCATGCCCTTTTAGGAAAATTTCTAATTTTACCTCAAATGTCACTATAAGGACAGCTTCAGCAAATTCAATGAGGGTCCATGTTATAGATTTTGGTATCCTTTATGGTCTTCAGTGGCCTACTTTTATACAGAGACTTTCATGGAGGGAAGGAGGACCACCAAAGCTTCGGATTACAGGAATAGACTTTCCACAACCTGGTTTCAGACCTGCAGAGAGAGTTATAGAAACAGGACGCCGCTTGGCAGCTTATGCTGAAGCCTTTAATGTTCCATTTGAATATAATGCCATAGCAAAGAAATGGGAAACAATTCAACTTGAAGAACTCAAGATTGATAGGGATGAGTTCCTTGTTGTTACCTGTTTTTATAGAGGTAAGAACTTGCTGGATGAATCTGTAGCAGTGGACAGTCCAAGGAATAGTTTCCTCAGTTTGATTAGGAAGATCAACCCAAATATATTCATTCATGGCATTATGAATGGGGCATTTAATGCCCCTTTCTTTGTTACCAGATTCAGGGAGGCACTGTTTCACTATTCATCACTATTTGATATGCTTGAAACTATTGTGCCTCGAGAGGACTGGGAAAGGATGCTGATTGAGAAAGAGATATTTGGGAGGGAAGCATTGAATGTTATAGCTTGTGAAGGCTGTGAAAGAGTAGAGAGGCCTGAGACATATAAGCAGTGGCAAGCACGTATTCTAAGGGCAGGGTTTTTGCAACAACCTTTTGATCATGAGACTGTGAAGATGGCAATGGAGAAAGTGAGCACTGGCTACCACAAGGATTTTGTAATTGATGAAGATAGCCAGTGGTTGTTGCAAGGTTGGAAGGGGCGTATCATTTATGCACTTTCTTGTTGGAGACCTGCATGA 2223 0.4112 MNQHILGFTGSTNEVRLRNQSLPILQGQRFAAGPRFENSFFEQSRKFDHLQSDPISANTPSSSTVTHEEHSPEDCDFSDAILSYISQILMEEDMEDKTCMLQDSLDLQAAEKSFYDVLGKKYPPSPIRNPSFINQNDGVGGNNLSVNYGNCPRTNGDLSSIFTTNFLLPNSVDFPQQSLQGNSILQSTYSPSNSVISSVEGPVDSPNSFPQVPDLSSESQSIWQFQKGVEEASKFLPSGNGLFPNLPALEPKVGIDDLSVKVEKDEEECVLGGSTGRKHPLREEGDVEENRSSKQAAIYSEPTLRSDMVDIILLHSAGDGKDHYVARREALQNKTNKTTLSSSQSKASSNGKGRGKKQRGKKEVIDLRTLLVLCAQAVAADDNRNAHELLKQIRQHSNPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKRRSAADILKAYHLYLAACPFRKISNFTSNVTIRTASANSMRVHVIDFGILYGLQWPTFIQRLSWREGGPPKLRITGIDFPQPGFRPAERVIETGRRLAAYAEAFNVPFEYNAIAKKWETIQLEELKIDRDEFLVVTCFYRGKNLLDESVAVDSPRNSFLSLIRKINPNIFIHGIMNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERVERPETYKQWQARILRAGFLQQPFDHETVKMAMEKVSTGYHKDFVIDEDSQWLLQGWKGRIIYALSCWRPA 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi408g00036 740 ProSiteProfiles GRAS family profile. 358 738 IPR005202 -
Sebi408g00036 740 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 307 732 IPR005202 -
Sebi408g00036 740 Pfam GRAS domain family 367 738 IPR005202 -
Sebi408g00036 740 MobiDBLite consensus disorder prediction 266 298 - -
Sebi408g00036 740 MobiDBLite consensus disorder prediction 51 66 - -
Sebi408g00036 740 MobiDBLite consensus disorder prediction 266 291 - -
Sebi408g00036 740 MobiDBLite consensus disorder prediction 332 361 - -
Sebi408g00036 740 MobiDBLite consensus disorder prediction 195 215 - -
Sebi408g00036 740 MobiDBLite consensus disorder prediction 332 351 - -
Sebi408g00036 740 MobiDBLite consensus disorder prediction 51 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi408g00036 Sebi-Chr408 598776 600998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi408g00036 73 739 GRAS Transcription Factor Family AT2G37650 56.388 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi408g00036 GRAS 2.4e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi408g00036 - - gmx:100780785 1174.84