Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi408g00017 ATGATAATTGATGATTTTGGACACAGTAGTTTAAAAAACGATGGCACTTCCAATGACCAAGGTATTGGGCCAATAAAAGAATACCAGGCTGCAATAGCTGCATCAGATTCAAAATCTAAGCCAGAATCTATTGATAGAGTGGATAATGTGGCTGAGCAACAAGAGTCTAATATGGATTCCCTTAAAGTGGCTGAGACCACAGAGAGTGCTAAAAAAGTGGAGATTCTAACCAAGCAATTGAATTATGAGATTCCTCATTTTCATGTGGACACCAGAGACAAAGCTGAGTTCAATTATGTGAAATATGTACTTGAGATATCTGGACTGACTGGTAATGATTGCCTTTCAGCATGGCATTCTAGTGACCAACCAATTGATCCATTACTTTATGAAGAAATGGAAGGTGATCCTGATTTCTGTACTTATGAAGCTGGTCAATGTAATCACCATGTATTGTTTGATTTAATTAATGAGACATTGTTGGAAATTTATGGGAAGTCTTACTGCTACCTTCCCATACAATTGTCATATCTTCCCCACATTCATCCAATGTCAGTAGGGTGTCACATTCTCCATCAAGTGTGGACTCATATGAGCAAGTGCATGAGATCCAAACCTGGCCAAACAATAGATGATCATGTAAATAGAGATCTAACAAAGCATGATGAGTGGGTGAACCTTCAATTATGTGCTGAGTGTGTAGGTTTGGAGCTGGGGAGACTTGATTTTCCATGA 735 0.3864 MIIDDFGHSSLKNDGTSNDQGIGPIKEYQAAIAASDSKSKPESIDRVDNVAEQQESNMDSLKVAETTESAKKVEILTKQLNYEIPHFHVDTRDKAEFNYVKYVLEISGLTGNDCLSAWHSSDQPIDPLLYEEMEGDPDFCTYEAGQCNHHVLFDLINETLLEIYGKSYCYLPIQLSYLPHIHPMSVGCHILHQVWTHMSKCMRSKPGQTIDDHVNRDLTKHDEWVNLQLCAECVGLELGRLDFP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi408g00017 244 Pfam Domain of unknown function (DUF4378) 96 240 IPR025486 -
Sebi408g00017 244 PANTHER PROTEIN TRM32 6 238 IPR044257 -
Sebi408g00017 244 Coils Coil 44 64 - -
Sebi408g00017 244 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi408g00017 Sebi-Chr408 271298 272659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi408g00017 77 243 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 44.444 1.49e-43 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi408g00017 - - gmx:121174644 327.405