Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi408g00016 ATGCCATCAGTAGCAAAATGGAGAGAAAATGGAAATTTCAATATAAATGAAGCAATAGTAAGAGATGTCAATTCTTCTTCAGGATCTGCTCAGGGTCAGAACCAGAAAGAAAGCAAACATGCTAAGAATCTCAAACAGAAAATAGAGCATGTAACTGGAGAGAGCAGAAAAGAAAAGCTTCGTGTTACAATGGATGCTGTCATTCATAAACTCCCCAAGGCCATGGGATATCAGATGACTTGA 243 0.3827 MPSVAKWRENGNFNINEAIVRDVNSSSGSAQGQNQKESKHAKNLKQKIEHVTGESRKEKLRVTMDAVIHKLPKAMGYQMT 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi408g00016 80 PANTHER PROTEIN TRM32 21 73 IPR044257 -
Sebi408g00016 80 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi408g00016 Sebi-Chr408 270466 270708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi408g00016 2 77 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 43.902 8.94e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi408g00016 - - cam:101499034 101.679