Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi407g00034 | ATGGTGAGAACCCCTTCTTCTGACAAAAATGGACTAAAGAAAGGAACCTGGAGTCCAGAAGAGGATAGGAAGTTAATGGCTTATGTCACTAAGTATGGCTGCTGGAATTGGAGCCAAATCCCAAGATTTGCGGGTCTGGCAAGGTGTGGAAAGAGTTGCAGACTTAGGTGGCTGAATTATCTCAGGCCCAACATAAAAAGAGGGAACTACACTCGAGAAGAAGAAGACACTATTATCAGACTGCACAATAAGTTGGGTAACAGATGGTCTGTCATTGCTACTCATTTACCAGGAAGAACAGATAACCAAATAAAGAACCACTGGCACACCACTCTTAAGAGGCGTTTTGGAAAGAACTCAGTGACAAATGAGATTAATGTTGAAGCCATAACAACTAAATCAAATGATTCTGGGACCAAGCAAGACAGGGACTTGGTTCAGAACAATGGTAATTCCTTCCACATTGGTTCAATGAGCACTTCCAACGCCTCTGATAGTAGCACTTTGTCCCCACAATTTTCCATGACCGAATTCTCCTCCATACCCTCAGATTATACCTCAGCTGCCACTAATAAAAATGTGTTAATGGATAATGACTTTGATTTTCTTGATGCATGCACGGAGGCTATGAACGAGAATTTCTGGACAGAGACATATCTACCTGACATTTGCTACACCCCAATTAAGATAGTGTCAGATATTGCTATTAATGGTAGTACAAATCAAG | 727 | 0.414 | MVRTPSSDKNGLKKGTWSPEEDRKLMAYVTKYGCWNWSQIPRFAGLARCGKSCRLRWLNYLRPNIKRGNYTREEEDTIIRLHNKLGNRWSVIATHLPGRTDNQIKNHWHTTLKRRFGKNSVTNEINVEAITTKSNDSGTKQDRDLVQNNGNSFHIGSMSTSNASDSSTLSPQFSMTEFSSIPSDYTSAATNKNVLMDNDFDFLDACTEAMNENFWTETYLPDICYTPIKIVSDIAINGSTNQ | 242 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi407g00034 | 242 | CDD | SANT | 69 | 112 | IPR001005 | - | |
Sebi407g00034 | 242 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
Sebi407g00034 | 242 | SMART | sant | 66 | 114 | IPR001005 | - | |
Sebi407g00034 | 242 | SMART | sant | 13 | 63 | IPR001005 | - | |
Sebi407g00034 | 242 | CDD | SANT | 16 | 61 | IPR001005 | - | |
Sebi407g00034 | 242 | Gene3D | - | 13 | 66 | - | - | |
Sebi407g00034 | 242 | MobiDBLite | consensus disorder prediction | 132 | 169 | - | - | |
Sebi407g00034 | 242 | Gene3D | - | 68 | 145 | - | - | |
Sebi407g00034 | 242 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Sebi407g00034 | 242 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 185 | - | - | |
Sebi407g00034 | 242 | SUPERFAMILY | Homeodomain-like | 11 | 108 | IPR009057 | - | |
Sebi407g00034 | 242 | Pfam | Myb-like DNA-binding domain | 67 | 111 | IPR001005 | - | |
Sebi407g00034 | 242 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Sebi407g00034 | 242 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Sebi407g00034 | 242 | FunFam | Transcription factor RAX3 | 7 | 67 | - | - | |
Sebi407g00034 | 242 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi407g00034 | Sebi-Chr407 | 945698 | 949586 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi407g00034 | 1 | 165 | MYB Transcription Factor Family | AT2G31180 | 51.479 | 3.98e-54 | 172 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Sebi407g00034 | Myb_DNA-binding | 8.5e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi407g00034 | K09422 | - | gmx:100811124 | 296.589 |