Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi406g00077 TCCATCATGGCCGACAAGCAGCCCCCATTGAATGGTGCCTTCTACGGGCCCGCCATTCCGCCGGTGGAGCAACCCCGCTACCGCCATCATCACCGCGGCAGAAGCTGCTGCTGCTGCCTCTTTGGCGTCTTCTGGAAGCTTCTGATCGCACTCATCGTCCTCTTTGGCCTCGCAATCCTCATCTTCTATCTCATCGTTCAACCTCGCGTATTCAAGTTCTATGTCAATAAAGCAGAGCTAACCCAATTTGACTACACAGACAACACGCTCCATTACAACATGGTGTTCAACTTCACAGCACGCAACCCCAACAAAAAGCTCAGCATCTATTACGACAAAGTGGAGGCATTGGCATTCTACGAGGGGTCAAGGTTCGCCAATACTGACGTCATCACCCACATGAATTCTTTCCGTCAGTACAAGAAAAGCAGCGACCCATGA 441 0.5147 SIMADKQPPLNGAFYGPAIPPVEQPRYRHHHRGRSCCCCLFGVFWKLLIALIVLFGLAILIFYLIVQPRVFKFYVNKAELTQFDYTDNTLHYNMVFNFTARNPNKKLSIYYDKVEALAFYEGSRFANTDVITHMNSFRQYKKSSDP 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi406g00077 146 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 23 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi406g00077 Sebi-Chr406 980568 981008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi406g00077 65 126 SNARE and Associated Proteins AT1G32270 36.508 1.60e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi406g00077 - - gmx:100807701 243.817