Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi406g00068 ATGCACTCAAATGCTTCCTCGTCTTGCTTGTTGGACTGGGCGAGCACTCTCTCACTCTCTGTTGTTTCCTTGTTCCACTTCCAGGTACCTTCTCTTCTCTTCCATTACCACTCTCTCCTTCCTTTCTATAGGCTTTCATTCTCTGTCTGTGTTATAGTAATCCTTGACATTTTCATTGCCTACACACGGACACGGTTTAATGCCAAGTGTTTGAACAAGGTCATGAGTGTAGACACTAATTTGCTTCCCAAGGCTAGAAGGCGTGCTAATTTTCGATTATGCAATGTGTCAAGTTACACCTCTGAAATACTGGAGATTCAAGCTGATGCTCCAAGGCTACATGTTCTGTTTGTTCCTGGAAACCCAGGTGTTATTTTATTCTACAAGGATTTCGTGGAATTTCTATATGAGCAACTAGGGGGAACTGCGTCTGTCACAGCTATTGGCCATGTCTCCCACTCGAGAAAGAACTGGGAGAACGGACGGTTGTTCTCTTTACAAGAACAAATTGATCATAAGATTGATTTCATCAGAGAGGAACTACAAAATATTGAGATTCCTATATTACTGGTTGGGCATTCTATTGGTTCATACATATCTATTGAAACGTTCAAGAAATCTCTGGAGAAGGTGAAATATTGCATTGGACTTTATCCATTTTTGACATTAAACCCAGACTCAGTTACACAGTTAGTTATTGGGAAAATTGCAAAATCTGAAATTATTGCTGCTGCTCTTAGTTACCTGATTGCATCATTAGGATTGTTGCCAGTCCAGGCTTTGAGGTTTATTGTCAGAAAATCCCTTGGGAAGTCATGGTCTACCAATGCAGTTGAAGCTGCATGCTCTCACTTGTCACAGTACCATACCATGCGCAATGTCCTCTATATGGCCATGACTGAATTCGCAAAGTTTTCAGAGACACCGGATTGGACATTTATAAGAGAAAGGAAGACTCAATTTGCATTTTTATTTGGTGTTGACGATCACTGGGGCCCACTTCAATTGCTTGAAGAGATTTCAAAGCAGGTTCCAGGGGGAAAAGGGTTGGAAACTGAGTTAGAGACCTACATGAAGGCCCCAAAGACAGTAGGGGGTTTCGGCAGAGCTGGCAGAGAAGGAGTGGCAGTAGAAAAAGATTCTGATGACCCTTATCTTGATTTCAGGCATTCCATGCTTCAAATGATATTGGAGAATGAGATATACTCAAAGGACGATCTGAGGGAGCTTCTGAATTGCTTTCTTCAGCTGAATTCACCTTATCATCATGGGGTTATAGTCAGAGCTTTCACTGAGATCTGGAATGGGGTCTTCTCTGTGAGGTCCAATTCACCAAAGCTTCAAATCCCCCGCAAGCCTCAAGAGGATTGTGAAGACCTTGAAGATCTTATTGTTATGCTAAGAGGGTTGGACTTTCAACCTGAGTTACAAAATGTTCAAGTTGCAATTAGGTTCTCCATTTGGGATCCTATTTTGAAAGGAGGGCAATTGAATGAGTTCACGGCAAGTTGTGTCATTGTTAAGAGGACAGAACAGGAGCTAGGCCTTGCAACAAGTTACCCGCATGGAACTCTGTATGTCATAAATTATAGATTGCCGTTGAAGCAAAACACTGACCTAACAAGCTATCCTAACATTTTCTTCTACAACGTTCACATATCGTACATTTATTAA 1674 0.4158 MHSNASSSCLLDWASTLSLSVVSLFHFQVPSLLFHYHSLLPFYRLSFSVCVIVILDIFIAYTRTRFNAKCLNKVMSVDTNLLPKARRRANFRLCNVSSYTSEILEIQADAPRLHVLFVPGNPGVILFYKDFVEFLYEQLGGTASVTAIGHVSHSRKNWENGRLFSLQEQIDHKIDFIREELQNIEIPILLVGHSIGSYISIETFKKSLEKVKYCIGLYPFLTLNPDSVTQLVIGKIAKSEIIAAALSYLIASLGLLPVQALRFIVRKSLGKSWSTNAVEAACSHLSQYHTMRNVLYMAMTEFAKFSETPDWTFIRERKTQFAFLFGVDDHWGPLQLLEEISKQVPGGKGLETELETYMKAPKTVGGFGRAGREGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPYHHGVIVRAFTEIWNGVFSVRSNSPKLQIPRKPQEDCEDLEDLIVMLRGLDFQPELQNVQVAIRFSIWDPILKGGQLNEFTASCVIVKRTEQELGLATSYPHGTLYVINYRLPLKQNTDLTSYPNIFFYNVHISYIY 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi406g00068 557 Pfam Transcriptional repressor, ovate 381 437 IPR006458 -
Sebi406g00068 557 PANTHER LIPASE 85 348 IPR019363 GO:0005811|GO:0016298|GO:0019915
Sebi406g00068 557 Gene3D alpha/beta hydrolase 98 360 IPR029058 -
Sebi406g00068 557 Pfam Lipid-droplet associated hydrolase 112 348 IPR019363 GO:0005811|GO:0016298|GO:0019915
Sebi406g00068 557 ProSiteProfiles OVATE domain profile. 377 436 IPR006458 -
Sebi406g00068 557 SUPERFAMILY alpha/beta-Hydrolases 109 348 IPR029058 -
Sebi406g00068 557 NCBIfam uncharacterized plant-specific domain TIGR01568 375 435 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi406g00068 Sebi-Chr406 840336 863146 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sebi406g00068 LIDHydrolase 1.6e-57 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi406g00068 - - gmx:100790552 489.96