Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi406g00035 ATGTCAGGGGGGAGGTTCATTAATTTACTTGTTGATTTTGTCTTGGCCACTTGGTTTATGTACATTGATGATATGCTCCCTATTAGCAGCAGTTATGGAAGGTACCAGAAAAAGGCAGCAAGGTTGATCCAAGAAGTGACTGCTTCTGCTAATGATGTAGCTCAAGAGACGTTGTCTCTTACTAGAACTGTTCGAGTTTATGGAACAAAAGAAGGAGAATTTGGAAGGTACAAATGGTGGCTGGGGAAATTAGCTGACATGAGCATGAGACAAAGAATGTCTATTCTTGCGGGTCATATTACAGCAGAGAAACTTACTAAGTTTATACTCTACAGTGAATGGGTAATTTATTCAACCTGGTGGGTGGGGGACAATATATCCTCTTTGATGCAATCAGTTGGAGCTAGTGAAAAAGTATTCCACTTAATGGATCTGTCACCTAGCAGCCAATTCATAGCAAGAGGAATAAAGTTGCAGAGGTTAACAGGACAAATTGAGTTTCTAAATGTATCTTTTCACTATCCTTCAAGACCAACGGTATCTGTAGTGCAACATGTAGACTTTTTTGTCAATCCTGGTGAGGTGGTTGCCATTGTTGGTCTTAGCGGTTGCGGAAAAAGCACATTGGTGAATCTTTTGCTCTGTCTCTATGAGCCTACAAATGGTCAGGTTTTGATAGATGGTATCCCTCTTAAAGACTTGGACATCATATGGTGGAGAGAGAGAATTGGATATGTGGGACAGGAACCCAAGCTATTCCGGATGGATATTAGTTCAAACATCATATATGGATGTACCCGAGATGTAAAGCAGGAGGATGTTGAATGGGCTGCAAAGGAAGCATATGCCCATGACTTCATATCAGCACTTCCCAATGGTTATGAAACACTTGTTGATGATGATCTGTTAAGTGGGGGACAAAAGCAGCGAATTGCTATTGCTAGGGACCCGAAAATATTGATCCTTGATGAAGCCACTAGTGCACTGGATGCTGAAAGTGAACATAATGTGAAGGTCTGCCTCTGA 1026 0.4142 MSGGRFINLLVDFVLATWFMYIDDMLPISSSYGRYQKKAARLIQEVTASANDVAQETLSLTRTVRVYGTKEGEFGRYKWWLGKLADMSMRQRMSILAGHITAEKLTKFILYSEWVIYSTWWVGDNISSLMQSVGASEKVFHLMDLSPSSQFIARGIKLQRLTGQIEFLNVSFHYPSRPTVSVVQHVDFFVNPGEVVAIVGLSGCGKSTLVNLLLCLYEPTNGQVLIDGIPLKDLDIIWWRERIGYVGQEPKLFRMDISSNIIYGCTRDVKQEDVEWAAKEAYAHDFISALPNGYETLVDDDLLSGGQKQRIAIARDPKILILDEATSALDAESEHNVKVCL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi406g00035 341 Gene3D - 163 338 IPR027417 -
Sebi406g00035 341 PANTHER ABC TRANSPORTER B FAMILY 28 339 IPR039421 -
Sebi406g00035 341 SMART AAA_5 192 341 IPR003593 GO:0016887
Sebi406g00035 341 Pfam ABC transporter 184 327 IPR003439 GO:0005524
Sebi406g00035 341 Gene3D ABC transporter type 1, transmembrane domain 99 162 IPR036640 GO:0005524|GO:0016020
Sebi406g00035 341 Gene3D ABC transporter type 1, transmembrane domain 24 95 IPR036640 GO:0005524|GO:0016020
Sebi406g00035 341 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 165 341 IPR003439 GO:0005524
Sebi406g00035 341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 338 IPR027417 -
Sebi406g00035 341 SUPERFAMILY ABC transporter transmembrane region 25 145 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi406g00035 Sebi-Chr406 399686 402836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi406g00035 139 341 Calmodulin-binding Proteins AT2G36910 47.619 7.31e-51 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi406g00035 - - gmx:100775951 539.65