Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi406g00002 ATGAAGATGATGGACTCCCACTCGCACAAGCAACTCTTCCCTCTCCTCTCTCTTTTCCTTATTCTACATCTCTCAGAGGCTCTCCTTCAACATCAGCAGCTAAATGATAACCCAACAAAATTGCTCGTTTTTGGAGACTCATATGCTGACACAGGTAACATAAGGAAAGGCTTGGCTAATTCATGGAAAGACCCTTATGGCATCACCTTTCCCGGCAAGCCCGCCGGTCGATTTTCCGACGGCAGGGTCCTCACCGACTACATCGCTAAGTATTTGAAAGTGAAATCGCCAGTCCCATACAGATTGAGGAAACTGATGCCACAACATCTAAAGTATGGGATGAACTTTGCATTTGGTGGAACTGGTGTGTTTGACACTTCGGTTCCAGCCCCAAACATGACAACACAGATCGATTTGTTGCAGCAGGTCATCAAATACAATGTGTACACTGCCTCAGATCTCTCCAACTCAGTCGCACTCGTCTCTGTCGCTGGAAATGACTATAGTCATTACTTGGCCACAAATGGCTCTGTTGAGGGTTTACCATCTTTTGTAGCCGCAGTGATTAATCAGACAAGCACGAACCTGATTCGCATCAAAGGGTTGGGAGTGAAGAAAATTGTTGTGAGCAATCTTCAACCCGTTGGATGCCTTCCTCGTATGACAGCCTCATCCTCATTCCAACATTGTAACGCCACATCCAACAACCTCGTACTTCTCCACAACGCACTCTTGAACGAAGCAGTTACCAAATTGAACCAATTAGAAACCAAAAACTCTTCTTCGGCGGCCTTCCTAGTTCTTAACATTTACGACAGCTTCATGTCGGTGTTGAACCACCCATCGACACATAACATTCAGAACGAGTTGATGCCATGCTGCGTTGGTGTGAGCAGTGAGTATTCATGTGGGAGTGTGGATGAGAAAAATAAGAATGTGAAGAAATATAGGGTGTGTGATGAGCCCAAATCGGCTTTCTTTTGGGATATGGTGCACCCTACGGAGGCAGGATGGCATGCGGTGTATAACAAGTTGAGAACCATGAATGCTCTTCAACAGATTCGTTACTAA 1071 0.4556 MKMMDSHSHKQLFPLLSLFLILHLSEALLQHQQLNDNPTKLLVFGDSYADTGNIRKGLANSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLKVKSPVPYRLRKLMPQHLKYGMNFAFGGTGVFDTSVPAPNMTTQIDLLQQVIKYNVYTASDLSNSVALVSVAGNDYSHYLATNGSVEGLPSFVAAVINQTSTNLIRIKGLGVKKIVVSNLQPVGCLPRMTASSSFQHCNATSNNLVLLHNALLNEAVTKLNQLETKNSSSAAFLVLNIYDSFMSVLNHPSTHNIQNELMPCCVGVSSEYSCGSVDEKNKNVKKYRVCDEPKSAFFWDMVHPTEAGWHAVYNKLRTMNALQQIRY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi406g00002 356 SUPERFAMILY SGNH hydrolase 38 345 - -
Sebi406g00002 356 CDD SGNH_plant_lipase_like 41 345 IPR035669 -
Sebi406g00002 356 Gene3D SGNH hydrolase 29 354 IPR036514 -
Sebi406g00002 356 PANTHER OSJNBB0059K02.9 PROTEIN 13 354 - -
Sebi406g00002 356 Pfam GDSL-like Lipase/Acylhydrolase 41 344 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi406g00002 Sebi-Chr406 18883 22696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi406g00002 15 341 Pollen Coat Proteome AT1G75930 27.221 4.00e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi406g00002 - - gmx:100788092 538.495