Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi405g00020 | ATGGAGTGCAACAAAGATGAGGCAGCTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATACTGGTGCAAAAAGAAAGCAGTACAGGAAGTTGGCTCTCACTCTTCATCCTGACAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTTGTTTCAGAGGCATGGAGTTTACTATCAGATAAGGTCAAGAGACTAGCATATAACCAGAATAGGAGTTCAGAAGGTTTTCAGCATTATGCTCCCAACCATGTCGGGTCTCGATCAGAAGCACCCAGTTCAAATGTTTTTTATAATCTTAAGAAGAATGCAACTTCAAATGAGAGAACTGGAAATAATAATGTGCAGCCACCTGCAACCTCCATTCCTCCACATAATATAGCTGAGAAGGGTCCACCTCCGAATGTTGTCAAGTCATCTAAATGGGCTCCTCGGCAACATCATCAGAAGTCACAACATCATGCTGGAAGGAATCACCCTATGAATCCAGGAAGAACATGTGCAGTTTCTCAAAACACAGATTCTTTTAATAATACAAACTTCCAGTGGGGTCCTCACTCAAGAATGGCTGGTTTTGTTAACACAGATGAACCATCATCTGTCGCTGCTGCAAGTGTTAAGCAGCAGGCAAGTGAGAAAAGAAGAGAATCTGAGGGAGCCCCATCAATTGCTGCATGGGAGAGGAGTCGCATGTATAAGAGATCTGATGGTTCTTTTAGTGATGTTGGAAATCCTATGAAGAAAATAAAGAAAGATGATATTTACATGAACAGGGTAAATCATATGACCATGGGAAATGGAGCAACTGGTTTGGGCAGTTTTTATGAATCAAGAAAGGCCAACATAGGAACAGAAAGGACTTGTGGTTTTTCAGGTGTTACTAGCAAGCACTGCAGCATAAGAGAGTTGTCAATGTCTGAATTACGAAAGATGTTGATCGGTAAGGCACAGATCGAAATTCGCAAGAAACTTCAAGATTGGAGATCAATGGCTGAAGCTAAGGTTACAAACAAGGACAAAGGAAATGAGAGGCAGAAAAGCACATTTAATGACAAAACAACTGGTCCAGAGAAGCATGGAGGTTCCACTATAAATGGTAACAGGCATGTGGACAGTGATTCTATCCCCGTCACATCTGATGACATGGTAAAGGATAGGAGCCAATCCTATGTTACAATCAATGTTCCAGATTCTGATTTTCACAATTTTGACTTGGATAGAGCTGAAAATTCCTTTGAGGAGGACCAGGTCTGGGCTGCTTATGATGATGATGATGGAATGCCTCGATATTATGCTAGAATTCACAAGGTGATCTCCACAAAGCCATTCAAAATACGGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTACAAAACTTGTGGGGATTTCAGGACTGGTGGACAAAAGGCACCAGAGGAGTTGTTCGCATCTTTCCTGGAAAGGGGGAAGTCTGGGCGCTCTATAAAAAACTGGTCTCCTGATTGGAATCAAAATACTCCAGATGAAGTGATACACAAGTATGATATGGTGGAGGTGCTTGAAGATTTCAATGAGGAGGAAGGTGTGTTAGTTACACCACTTGTCAAGGTTGATGGTTTTAAGACAGTGTTTCACAGGGACAGCCGTGATCAGGTAAGGAAGATTCCAAAAGTTGAGATGTTTCGCTTCTCTCATCAGGTTCCTAACTACTTGCTTACTGGACAAGAAGCTCATAATGCTCCAAAGGGCTGTAGAGAGTTGGATCCTGCAGCTACTCCTTTAGATCTTCAGACAACAACAGAAGCTAATGAGGCATTGGATAATGTTGGAAAATCTAAGGAAGACAAATTGCCCATTTCACCTGAAAAACGTGCATCTGGTAAGGCAGAGAATGCTTCGTAA | 1929 | 0.4199 | MECNKDEAARAKEIAERKFSEREYTGAKRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKVKRLAYNQNRSSEGFQHYAPNHVGSRSEAPSSNVFYNLKKNATSNERTGNNNVQPPATSIPPHNIAEKGPPPNVVKSSKWAPRQHHQKSQHHAGRNHPMNPGRTCAVSQNTDSFNNTNFQWGPHSRMAGFVNTDEPSSVAAASVKQQASEKRRESEGAPSIAAWERSRMYKRSDGSFSDVGNPMKKIKKDDIYMNRVNHMTMGNGATGLGSFYESRKANIGTERTCGFSGVTSKHCSIRELSMSELRKMLIGKAQIEIRKKLQDWRSMAEAKVTNKDKGNERQKSTFNDKTTGPEKHGGSTINGNRHVDSDSIPVTSDDMVKDRSQSYVTINVPDSDFHNFDLDRAENSFEEDQVWAAYDDDDGMPRYYARIHKVISTKPFKIRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGGQKAPEELFASFLERGKSGRSIKNWSPDWNQNTPDEVIHKYDMVEVLEDFNEEEGVLVTPLVKVDGFKTVFHRDSRDQVRKIPKVEMFRFSHQVPNYLLTGQEAHNAPKGCRELDPAATPLDLQTTTEANEALDNVGKSKEDKLPISPEKRASGKAENAS | 642 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi405g00020 | 642 | CDD | DnaJ | 29 | 65 | IPR001623 | - | |
Sebi405g00020 | 642 | MobiDBLite | consensus disorder prediction | 616 | 632 | - | - | |
Sebi405g00020 | 642 | MobiDBLite | consensus disorder prediction | 337 | 357 | - | - | |
Sebi405g00020 | 642 | Pfam | DnaJ domain | 29 | 73 | IPR001623 | - | |
Sebi405g00020 | 642 | PANTHER | BNAC03G44070D PROTEIN | 29 | 602 | - | - | |
Sebi405g00020 | 642 | Pfam | Domain of unknown function (DUF3444) | 396 | 585 | IPR024593 | - | |
Sebi405g00020 | 642 | MobiDBLite | consensus disorder prediction | 108 | 172 | - | - | |
Sebi405g00020 | 642 | MobiDBLite | consensus disorder prediction | 608 | 642 | - | - | |
Sebi405g00020 | 642 | Gene3D | DnaJ domain | 18 | 118 | IPR036869 | - | |
Sebi405g00020 | 642 | ProSiteProfiles | dnaJ domain profile. | 7 | 76 | IPR001623 | - | |
Sebi405g00020 | 642 | MobiDBLite | consensus disorder prediction | 337 | 383 | - | - | |
Sebi405g00020 | 642 | SMART | dnaj_3 | 22 | 68 | IPR001623 | - | |
Sebi405g00020 | 642 | SUPERFAMILY | Chaperone J-domain | 29 | 92 | IPR036869 | - | |
Sebi405g00020 | 642 | MobiDBLite | consensus disorder prediction | 108 | 125 | - | - | |
Sebi405g00020 | 642 | PRINTS | DnaJ domain signature | 48 | 68 | IPR001623 | - | |
Sebi405g00020 | 642 | PRINTS | DnaJ domain signature | 32 | 47 | IPR001623 | - | |
Sebi405g00020 | 642 | MobiDBLite | consensus disorder prediction | 204 | 226 | - | - | |
Sebi405g00020 | 642 | MobiDBLite | consensus disorder prediction | 358 | 377 | - | - | |
Sebi405g00020 | 642 | ProSitePatterns | Nt-dnaJ domain signature. | 53 | 72 | IPR018253 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi405g00020 | Sebi-Chr405 | 713342 | 715590 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi405g00020 | 29 | 73 | SUVH1 or 3-interacting DNAJ domain-containing protein superfamily | AT2G01710 | 48.889 | 5.52e-07 | 50.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi405g00020 | - | - | gmx:100792212 | 865.529 |