Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi405g00020 ATGGAGTGCAACAAAGATGAGGCAGCTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATACTGGTGCAAAAAGAAAGCAGTACAGGAAGTTGGCTCTCACTCTTCATCCTGACAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTTGTTTCAGAGGCATGGAGTTTACTATCAGATAAGGTCAAGAGACTAGCATATAACCAGAATAGGAGTTCAGAAGGTTTTCAGCATTATGCTCCCAACCATGTCGGGTCTCGATCAGAAGCACCCAGTTCAAATGTTTTTTATAATCTTAAGAAGAATGCAACTTCAAATGAGAGAACTGGAAATAATAATGTGCAGCCACCTGCAACCTCCATTCCTCCACATAATATAGCTGAGAAGGGTCCACCTCCGAATGTTGTCAAGTCATCTAAATGGGCTCCTCGGCAACATCATCAGAAGTCACAACATCATGCTGGAAGGAATCACCCTATGAATCCAGGAAGAACATGTGCAGTTTCTCAAAACACAGATTCTTTTAATAATACAAACTTCCAGTGGGGTCCTCACTCAAGAATGGCTGGTTTTGTTAACACAGATGAACCATCATCTGTCGCTGCTGCAAGTGTTAAGCAGCAGGCAAGTGAGAAAAGAAGAGAATCTGAGGGAGCCCCATCAATTGCTGCATGGGAGAGGAGTCGCATGTATAAGAGATCTGATGGTTCTTTTAGTGATGTTGGAAATCCTATGAAGAAAATAAAGAAAGATGATATTTACATGAACAGGGTAAATCATATGACCATGGGAAATGGAGCAACTGGTTTGGGCAGTTTTTATGAATCAAGAAAGGCCAACATAGGAACAGAAAGGACTTGTGGTTTTTCAGGTGTTACTAGCAAGCACTGCAGCATAAGAGAGTTGTCAATGTCTGAATTACGAAAGATGTTGATCGGTAAGGCACAGATCGAAATTCGCAAGAAACTTCAAGATTGGAGATCAATGGCTGAAGCTAAGGTTACAAACAAGGACAAAGGAAATGAGAGGCAGAAAAGCACATTTAATGACAAAACAACTGGTCCAGAGAAGCATGGAGGTTCCACTATAAATGGTAACAGGCATGTGGACAGTGATTCTATCCCCGTCACATCTGATGACATGGTAAAGGATAGGAGCCAATCCTATGTTACAATCAATGTTCCAGATTCTGATTTTCACAATTTTGACTTGGATAGAGCTGAAAATTCCTTTGAGGAGGACCAGGTCTGGGCTGCTTATGATGATGATGATGGAATGCCTCGATATTATGCTAGAATTCACAAGGTGATCTCCACAAAGCCATTCAAAATACGGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTACAAAACTTGTGGGGATTTCAGGACTGGTGGACAAAAGGCACCAGAGGAGTTGTTCGCATCTTTCCTGGAAAGGGGGAAGTCTGGGCGCTCTATAAAAAACTGGTCTCCTGATTGGAATCAAAATACTCCAGATGAAGTGATACACAAGTATGATATGGTGGAGGTGCTTGAAGATTTCAATGAGGAGGAAGGTGTGTTAGTTACACCACTTGTCAAGGTTGATGGTTTTAAGACAGTGTTTCACAGGGACAGCCGTGATCAGGTAAGGAAGATTCCAAAAGTTGAGATGTTTCGCTTCTCTCATCAGGTTCCTAACTACTTGCTTACTGGACAAGAAGCTCATAATGCTCCAAAGGGCTGTAGAGAGTTGGATCCTGCAGCTACTCCTTTAGATCTTCAGACAACAACAGAAGCTAATGAGGCATTGGATAATGTTGGAAAATCTAAGGAAGACAAATTGCCCATTTCACCTGAAAAACGTGCATCTGGTAAGGCAGAGAATGCTTCGTAA 1929 0.4199 MECNKDEAARAKEIAERKFSEREYTGAKRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKVKRLAYNQNRSSEGFQHYAPNHVGSRSEAPSSNVFYNLKKNATSNERTGNNNVQPPATSIPPHNIAEKGPPPNVVKSSKWAPRQHHQKSQHHAGRNHPMNPGRTCAVSQNTDSFNNTNFQWGPHSRMAGFVNTDEPSSVAAASVKQQASEKRRESEGAPSIAAWERSRMYKRSDGSFSDVGNPMKKIKKDDIYMNRVNHMTMGNGATGLGSFYESRKANIGTERTCGFSGVTSKHCSIRELSMSELRKMLIGKAQIEIRKKLQDWRSMAEAKVTNKDKGNERQKSTFNDKTTGPEKHGGSTINGNRHVDSDSIPVTSDDMVKDRSQSYVTINVPDSDFHNFDLDRAENSFEEDQVWAAYDDDDGMPRYYARIHKVISTKPFKIRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGGQKAPEELFASFLERGKSGRSIKNWSPDWNQNTPDEVIHKYDMVEVLEDFNEEEGVLVTPLVKVDGFKTVFHRDSRDQVRKIPKVEMFRFSHQVPNYLLTGQEAHNAPKGCRELDPAATPLDLQTTTEANEALDNVGKSKEDKLPISPEKRASGKAENAS 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi405g00020 642 CDD DnaJ 29 65 IPR001623 -
Sebi405g00020 642 MobiDBLite consensus disorder prediction 616 632 - -
Sebi405g00020 642 MobiDBLite consensus disorder prediction 337 357 - -
Sebi405g00020 642 Pfam DnaJ domain 29 73 IPR001623 -
Sebi405g00020 642 PANTHER BNAC03G44070D PROTEIN 29 602 - -
Sebi405g00020 642 Pfam Domain of unknown function (DUF3444) 396 585 IPR024593 -
Sebi405g00020 642 MobiDBLite consensus disorder prediction 108 172 - -
Sebi405g00020 642 MobiDBLite consensus disorder prediction 608 642 - -
Sebi405g00020 642 Gene3D DnaJ domain 18 118 IPR036869 -
Sebi405g00020 642 ProSiteProfiles dnaJ domain profile. 7 76 IPR001623 -
Sebi405g00020 642 MobiDBLite consensus disorder prediction 337 383 - -
Sebi405g00020 642 SMART dnaj_3 22 68 IPR001623 -
Sebi405g00020 642 SUPERFAMILY Chaperone J-domain 29 92 IPR036869 -
Sebi405g00020 642 MobiDBLite consensus disorder prediction 108 125 - -
Sebi405g00020 642 PRINTS DnaJ domain signature 48 68 IPR001623 -
Sebi405g00020 642 PRINTS DnaJ domain signature 32 47 IPR001623 -
Sebi405g00020 642 MobiDBLite consensus disorder prediction 204 226 - -
Sebi405g00020 642 MobiDBLite consensus disorder prediction 358 377 - -
Sebi405g00020 642 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi405g00020 Sebi-Chr405 713342 715590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi405g00020 29 73 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 48.889 5.52e-07 50.4