Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi403g00035 ATGGCTGGGGGAAGGAGGAGGAAGCACCACTTCAGCAGAATTCATGCATTCACTTGTGGGAAAGCTTCCATGAAAGAGGAGCATTCACTTATAGGAGGCCCTGGATTTTCAAGGAAAGTCTATTGCAATGACTCAGAACGTGCTATGGCAAGTCTTTTGAATTATGGTGACAATTATGTTAGAACAACAAAGTATACATTGGCCACTTTCATTCCCAAGTCCTTGTTTGAGCAATTCAGGAGGGTTGCCAATTTTTACTTCCTAGTATGTGCAGTTTTGTCTTTCTTCCCTGTTGCTCCTTACTCAGCTGTCAGCAATGTTGTTCCTCTAGTGGTTGTGGTTGCTGCTACAATGGCCAAAGAGTTCATTGAGGATTTCAGGAGAAAAACTCAGGATATAGAGATGAATAACAGGAAAGTAAAAGTACATCAAGGAGGTGGTGTTTTTGACTATTCTAAATGGAGGGATTTGAAAGTTGGGGACATAGTGAAGGTGGAAAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTTGCATCAAACTATGATGATGCAATTTGCTATGTTGAGACAATGAATCTTGATGGAGAAACAAATCTTAAACTGAAACAAGCATTGGAAGGAACTTCAAAGATGCAAGAAGACTCATATTTTCAAAATTTCAAGGCTGTCATTAGATGTGAAGATCCAAATGCAAATTTGTACACATTTGTAGGCAGTCTGGAGCTTGAGGATCAACAATTTCCTCTTGCACCTCAGCAGCTACTTCTTAGAGATTCTAAGCTGAGGAACACAGATTTTATCTATGGTGTGGTAATCTTTACTGGTCATGATACAAAGGTTATGCAGAACTCAACAGATCCTCCATCCAAGAGAAGCAAAATTGAGAAAAGGATGGATAAGATTATCTACTGCCTCTTCTTTGTCCTAATTCTAGTTTCTTTCATTGGGTCCATATTCTTTGGAATTACAACAAAGAGGGACCTTAAAAATGGAAGAATGAAGAGATGGTACCTTAGACCAGATGATACCAAAGTTTTCTATGATCCAGATAGAGCACCCCTTGCAGCAATTCTGCATTTCTTCACAGCACTCATGTTGTATAGTTACTTCATTCCAATTTCCTTGTATGTCTCCATTGAAATTGTGAAAATTCTTCAAAGCATTTTCATCAACCAGGATGTGCACATGTATTATGAGGAAACTGACAAGCCAGCACATGCTCGCACATCAAATTTGAATGAAGAACTTGGCCAAGTTGAGACCATACTTTCAGATAAAACAGGAACTTTGACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGGACTGCTTATGGAAGAGGATTTACAGAAGTTGAGAGAGCTCTATCTAAGAGAAGAGAATCACCTTTTGGTAAAAAAACAACAAAGAATGCTGTATCAAAGTCATCCATTAAAGGGTTTAACTTTACAGATGAAAGGATCATGAATGGAAATTGGGTCAGAGAACCTAATGCTAAAGTAATCCAGAACTTCCTAAGGTTGTTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAAGGAACTGGCAAGGTTTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCCAGAGAACTTGGTTTTGAATTTTATGAAAGGACACATACAAATATTTCACTGCGTGAATCAGACCCCTCATCAGGCCAGAAAATTGAAAGGTCCTACAAACTTTTAAATATATTAGAGTTTAGCAGTGCAAGAAAGAGGATGTCTGTAATTGTAAGAGATGAAGAGGGGAAACTACTACTACTTAGCAAAGGCGCTGACAGTGTCATGTTTGAGAGACTTGCCAAGAATGGAAGGGAGTTTGAAGAGAAGACTAAAGAGCACATTGGTGAATATGCTGATTCTGGTTTAAGGACCTTGATACTTGCATATCGTGAACTCAGAGAGGAAGAGTACAATCAGTTTAATAAAGAGTTAACAGATGCCAAGAACTTAGTGAGTGCAGATCAGGAGGAGATTGTAGAGGGAATATTACAAAATATTGAGAAGGATTTAATTCTTCTTGGTGCTACAGCAGTTGAAGACAAACTACAAGATGGGGTTCCTGAATGCATTGACAAACTAGCACAGGCTGGGATTAAGCTATGGGTTTTGACTGGTGATAAAATGGAGACAGCAATTAATATTGGATTTGCTTGTAGTTTACTGAGACAAGGAATGAAACAAATTATAATTACCTCAGAAACTCCAGAAAACAAATCACTGGAGAAAATGGAGGACAAGTCTGCTGCTGAAGCGGCACTTAAGGCAAGCGTTCTTCAACAAATAAAGGATGCAAAGTCATTACTTTCTAGATCACATGAAAACTCTGAGGCATTAGCTCTGATCATTGATGGGAAGTCTCTTACTCATGCACTAGAAGATGATGTAAAGGACTTGTTTCTTGAACTTGCCATTGGCTGTGCATCTGTGATATGCTGTCGTTCATCTCCCAAGCAAAAAGCACTTGTTACAAGATTGGTTAAGTTAAGAACTGGTAGCACAACTCTAGCTATAGGAGATGGTGCAAATGATGTTGGAATGCTCCAAGAAGCTGACATTGGAATTGGTATCAGTGGTGTAGAAGGAATGCAGGCAGTTATGTCAAGTGATATTGCAATTGCCCAATTTCGGTATCTAGAACGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATCTCATCAATGATCTGTTACTTCTTTTACAAGAATATCACCTTTGGCTTCACTCTATTCTTCTATGAGATGTATGCCTCATTCTCAGGGCAACCTGCATACAATGATTGGTTCATGTCATTTTATAATGTATTCTTCACTTCACTTCCTGTCATTGCTTTGGGAGTATTTGACCAAGATGTCTCTTCCAAATTATGTCTCAAGTTCCCATTATTATATCAAGAAGGGGTGCAAAACATCCTATTTAGCTGGAAAAGAATCCTTGGTTGGGCACTCAATGGAGTTTCAAGTGCAGCCATCATATTCTTCTTCTGCATTCGCGCTATGGAGCATCAAGCATTCCGGAAAGGAGGTGAAGTTGTTGGACTAGAAGTTCTTGGAGCCACCATGTACACTTGTGTTGTGTGGGTGGTGAATTGCCAAATGGCATTATCTATCAGTTACTTCACTTACATACAACACATATTCATATGGGGAAGCATTGTATTATGGTACATTTTCCTCATGGCATATGGAGCCATAGACCCTACTATCTCAACCACAGCTTATAAGGTCTTCATTGAAGCATTGGCACCAGCACCATCTTATTGGTTTGTGACTTTGCTTGTTCTAATTGCTGCACTCATTCCATATTTTGCATATGCTTCCATCCAAATGCGTTTCTTCCCTATGTATCATCAAATGATACAATGGATAAGAAAAGATGGACAAACAAATGATCCAGAGTATTGTGATGTGGTGAGACAGAGATCAATAAGACATACAACAGTTGGATTCACAGCTCGTTTAGAAGCTTCTAGACGTTATGAAGCATCCAAACGTTTTGATATATCTAAACGTTCTGAAGCTTCCATAGCATCATGA 3597 0.39 MAGGRRRKHHFSRIHAFTCGKASMKEEHSLIGGPGFSRKVYCNDSERAMASLLNYGDNYVRTTKYTLATFIPKSLFEQFRRVANFYFLVCAVLSFFPVAPYSAVSNVVPLVVVVAATMAKEFIEDFRRKTQDIEMNNRKVKVHQGGGVFDYSKWRDLKVGDIVKVEKDEFFPADLILLASNYDDAICYVETMNLDGETNLKLKQALEGTSKMQEDSYFQNFKAVIRCEDPNANLYTFVGSLELEDQQFPLAPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKIEKRMDKIIYCLFFVLILVSFIGSIFFGITTKRDLKNGRMKRWYLRPDDTKVFYDPDRAPLAAILHFFTALMLYSYFIPISLYVSIEIVKILQSIFINQDVHMYYEETDKPAHARTSNLNEELGQVETILSDKTGTLTCNSMEFIKCSIAGTAYGRGFTEVERALSKRRESPFGKKTTKNAVSKSSIKGFNFTDERIMNGNWVREPNAKVIQNFLRLLAVCHTAIPEVDEGTGKVSYEAESPDEAAFVIAARELGFEFYERTHTNISLRESDPSSGQKIERSYKLLNILEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLAKNGREFEEKTKEHIGEYADSGLRTLILAYRELREEEYNQFNKELTDAKNLVSADQEEIVEGILQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIITSETPENKSLEKMEDKSAAEAALKASVLQQIKDAKSLLSRSHENSEALALIIDGKSLTHALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKLRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFYEMYASFSGQPAYNDWFMSFYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGVQNILFSWKRILGWALNGVSSAAIIFFFCIRAMEHQAFRKGGEVVGLEVLGATMYTCVVWVVNCQMALSISYFTYIQHIFIWGSIVLWYIFLMAYGAIDPTISTTAYKVFIEALAPAPSYWFVTLLVLIAALIPYFAYASIQMRFFPMYHQMIQWIRKDGQTNDPEYCDVVRQRSIRHTTVGFTARLEASRRYEASKRFDISKRSEASIAS 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi403g00035 1198 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Sebi403g00035 1198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 29 1147 - -
Sebi403g00035 1198 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Sebi403g00035 1198 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Sebi403g00035 1198 PRINTS P-type cation-transporting ATPase superfamily signature 742 752 - -
Sebi403g00035 1198 NCBIfam HAD-IC family P-type ATPase 822 938 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi403g00035 1198 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Sebi403g00035 1198 FunFam Phospholipid-transporting ATPase 116 286 - -
Sebi403g00035 1198 Pfam Cation transport ATPase (P-type) 527 618 - -
Sebi403g00035 1198 Gene3D - 531 666 IPR023299 GO:0000166
Sebi403g00035 1198 FunFam Phospholipid-transporting ATPase 534 692 - -
Sebi403g00035 1198 NCBIfam phospholipid-translocating P-type ATPase 55 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Sebi403g00035 1198 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1134 IPR023298 -
Sebi403g00035 1198 Pfam Phospholipid-translocating P-type ATPase C-terminal 884 1134 IPR032630 -
Sebi403g00035 1198 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 491 693 IPR023299 GO:0000166
Sebi403g00035 1198 CDD P-type_ATPase_APLT_Dnf-like 57 1016 - -
Sebi403g00035 1198 Gene3D - 114 286 - -
Sebi403g00035 1198 Coils Coil 649 676 - -
Sebi403g00035 1198 SUPERFAMILY Calcium ATPase, transduction domain A 139 284 IPR008250 -
Sebi403g00035 1198 SFLD p-type atpase 406 907 IPR044492 -
Sebi403g00035 1198 Gene3D - 688 896 IPR023214 -
Sebi403g00035 1198 SFLD Haloacid Dehalogenase 406 907 - -
Sebi403g00035 1198 SUPERFAMILY HAD-like 419 911 IPR036412 -
Sebi403g00035 1198 FunFam Phospholipid-transporting ATPase 692 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi403g00035 Sebi-Chr403 590810 596053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi403g00035 10 1182 Primary Pumps ATPases AT3G25610 71.647 0.0 1801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi403g00035 K01530 - gmx:100799312 2118.2