Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi403g00027 ATGGCCACTCTCTCCTTCAAAGCCTCATACCCATTTTTCCTTTGCTTGATTCTTTTCTGTGGCTCTCAAGTATTGCTTATCAATTGTACTGAATTTGAAGTTGGTGGTAAAGATGGTTGGGTTGTCCCAAAATCAAAGGACAATTCTGATATGTATAACCAATGGGCATCCCAAAACAGATTCAAAGTTAATGACACTGTTCGTTTCAAGTATGAGAAAGACTCTGTTATGGTGGTGACTGAAGAAGAGTATGGAAAATGCAAATCCTCTCGTCCTCTTTTTTTCTCTAACAATGGTGACACTATCTACAAATTTGATCGACCTGGCATGTTCTATTTCATTAGTGGGGTTAGTGGTCACTGTGACAGAGGGCAGAAGATGATCATTAAGGTTTTGAATGTAGAGCCAGCAGCACCTTCACCTCAATCTGCAAATGAGAGTGCACAGAAATCACCTTCTAATGGTGGAGTTGTTGGAATGGCTCCTCTGAGTATCACAACATTGACACTTTTTGTTTTGTCATTCTTGGCCCTGCTTTATGCTTGA 546 0.4029 MATLSFKASYPFFLCLILFCGSQVLLINCTEFEVGGKDGWVVPKSKDNSDMYNQWASQNRFKVNDTVRFKYEKDSVMVVTEEEYGKCKSSRPLFFSNNGDTIYKFDRPGMFYFISGVSGHCDRGQKMIIKVLNVEPAAPSPQSANESAQKSPSNGGVVGMAPLSITTLTLFVLSFLALLYA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi403g00027 181 FunFam Early nodulin-like protein 1 29 136 - -
Sebi403g00027 181 ProSiteProfiles Phytocyanin domain profile. 30 133 IPR003245 GO:0009055
Sebi403g00027 181 Pfam Plastocyanin-like domain 48 125 IPR003245 GO:0009055
Sebi403g00027 181 Gene3D - 29 136 IPR008972 -
Sebi403g00027 181 PANTHER BLUE COPPER PROTEIN 30 144 IPR039391 GO:0009055
Sebi403g00027 181 CDD OsENODL1_like 30 132 IPR041846 -
Sebi403g00027 181 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi403g00027 Sebi-Chr403 500823 501474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi403g00027 13 173 Phytocyanin Superfamily AT1G48940 50.292 2.37e-61 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi403g00027 - - gmx:102667643 258.07