Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi402g00047 ATGAAACCCGTGGTGATCCATGTGGACCCAGGTGTAGACGTGATGGAAGCCATTATTAACTATGCTCACAACCACAACACCGGAATCATGGTGCTTAGCGGGTCTGGTTCTATTTCCAACTTGACTCTTTCCCACTCTGTTTCCTATTCTCCTTCTTCTTCTTTCACCCTTCAAGGACCCTTTAATTTGTTTGCCTTTAGTGGTGCCTATATAAGTTTCCCTAATTCCCCTCTTGATGGTGCTTCGAATTCCTCATCCAACCCTAACATGTACACATCATCTTCCTTTAGAATCTCCTTTATGAGCGCTCAAAGTAAGATGTATGGTGGGATTGTTGGTGGGAAGGTTCTGTCGGCTAATGATGTGCAGGTGGTAGTTAGCTTGCTCAAGAATCCTAATTTTCATAGGGTTCCTGGTATCAATGAAAATGACGGTAAAGAAGGATATAACCCTAATAATTAA 462 0.4242 MKPVVIHVDPGVDVMEAIINYAHNHNTGIMVLSGSGSISNLTLSHSVSYSPSSSFTLQGPFNLFAFSGAYISFPNSPLDGASNSSSNPNMYTSSSFRISFMSAQSKMYGGIVGGKVLSANDVQVVVSLLKNPNFHRVPGINENDGKEGYNPNN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi402g00047 153 SUPERFAMILY AF0104/ALDC/Ptd012-like 1 138 - -
Sebi402g00047 153 ProSiteProfiles PPC domain profile profile. 1 152 IPR005175 -
Sebi402g00047 153 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 145 IPR014476 GO:0003680
Sebi402g00047 153 Pfam Plants and Prokaryotes Conserved (PCC) domain 2 129 IPR005175 -
Sebi402g00047 153 Gene3D - 2 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi402g00047 Sebi-Chr402 911008 911469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi402g00047 1 151 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 32.484 2.10e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi402g00047 - - qsa:O6P43_014714 117.857