Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi402g00037 ATGTCTGATATTGACATAAATTTGCCAACAATAGTTTTTGAGCAAGAGGTGTTGTATAAGGAGTGTAGGCACAACCCTGTAGCAAAACTCGGTCGTGTTTCCCATGATGGATGCCCAGAGTTTCTCCAAGACACCGCTAATGATGCTATGCTGTGTGCTGCTTGTGGGTGTCACCGAAGCTTTCACCGTAAACAAATTGTCTACAAACCCATAGACATACCCCAAATTGCAGACAATAATATGACTGCAACAAGGTCGTCACCTGTGGGCCCAGTTGTGCAATTCAACCCCCCAGGCCCAGAGCCACCAAAGACGAGGAAGAGAACAAGGTTCACACCGGAGCAAAAGAATCGAATGATGAGTTTTGCTGAGAGGTTTGAGTGGAAACCTCAAAGGGCAAACAAGGAAGAAATCCAACATTTCTGCTTAGAGATGGGAATCACTCACAAAATATTCATGGTCTGGCTCCGCAACAACTGTCATCGAGCAACACACAAGAATTAA 504 0.4504 MSDIDINLPTIVFEQEVLYKECRHNPVAKLGRVSHDGCPEFLQDTANDAMLCAACGCHRSFHRKQIVYKPIDIPQIADNNMTATRSSPVGPVVQFNPPGPEPPKTRKRTRFTPEQKNRMMSFAERFEWKPQRANKEEIQHFCLEMGITHKIFMVWLRNNCHRATHKN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi402g00037 167 SUPERFAMILY Homeodomain-like 98 162 IPR009057 -
Sebi402g00037 167 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 19 65 IPR006456 -
Sebi402g00037 167 NCBIfam homeobox domain, ZF-HD class 104 159 IPR006455 -
Sebi402g00037 167 Pfam ZF-HD protein dimerisation region 17 66 IPR006456 -
Sebi402g00037 167 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 19 65 IPR006456 -
Sebi402g00037 167 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 15 161 - -
Sebi402g00037 167 Gene3D - 96 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi402g00037 Sebi-Chr402 674167 674670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi402g00037 10 159 ZF-HD Transcription Factor Family AT1G69600 32.984 3.29e-26 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Sebi402g00037 ZF-HD_dimer 1.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi402g00037 - - pcin:129285637 150.599