Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi402g00035 | ATGAGTTCGATTATCATGGTGGAGGTTTTGAATTTGAGCGCGGGTGAAGAATTTGAGGTGTTGGAGTGTGCCAATTCGGGGTTCGGGGGATTATTGGGTGAATGGAAGGTTTCGGATATGAGAATGGATGAAAGTGGTCCTGTAGAAAGAGACATTGAGCAGGCTATTACTGCTTTAAAGAAAGGGGCTTACTTGCTGAAGTATGGAAGAAGGGGGAAGCCCAAGTTTTGCCCCTTTCGGCTTTCCAATGATGAATCTGTATTGATATGGTTCTCAGGAAAAGAAGAGAAGCGCCTTAAACTAGCTAATGTTTCTAGAATTATATCTGGACAACGCACACCTATCTTTCAAAGATATCCGCGGCCTGAGAAGGAATATCAGTCATTTTCTCTTATCTACAATGATAGATCACTGGACTTGATTTGCAAGGATAAAGATGAAGCTGAGGTTTGGTTTAGTGGATTAAAAGCACTGATTTCGCGCAGTCATCACCGGAAGTGGAGAACAGAGTCAAGAAGTGATGGTTTTCCATCTGAAGCTAATAGTCCTCGAACATACACCAGAAGAAGTTCTCCCTTAAATTCTCCATTTGGTAGTAATGAAAGCTTGCAGAAGGATAGTGGGGATCATCTTCGCCTTCATAGCCCATATGAAAGCCCCCCTAAGAATGGTTTGGATAAAGCATTTTCTGATGTGATGTACTATCCTATTCCTCCAAAGGGTTTCTTCCCTCCAGATTCCGCCAGTGGTTCAGTCCACTCTGTGTCATCAGGAGGATCAGATAGTATGCATGGCCACATGAAGACAATGCCTATGGATGCTTTTAGAGTTAGTCTATCAAGTGCTGTTAGCTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCCTTAGGGGATGTTTTCATTTGGGGGGAATGCACAGGTGATGGTGTTCTGGGTGGTGGACCTCACCGAGTTGGGAGTTGTCTTGATGTCAAAATGGATTCTCTATTGCCCAAAGCCTTGGAATCGGCAGTGGTTCTTGATGTGCAGAATATTGCTTGCGGTGGGCAACATGCGGCCTTAGTGACCAAACAAGGTGAGATTTTCTCCTGGGGGGAAGAATCAGGAGGCAGGCTTGGGCATGGAGTTGATTCTGATGTTCTTCATCCAAAGCTTATTGAATCTCTAAGTAATACGAATATCGAACTTGTAGCTTGTGGGGAGTATCATACATGCGCTGTGACACTTTCTGGTGATCTTTATACATGGGGTGATGGCACTCACATTTATGGTCTTTTGGGGCATGGAAATCAGGTGAGCCACTGGGTCCCAAAAAGAGTAAATGGCCCCTTGGAGGGCATACACGTTTCATCTATTTCTTGTGGTCCATGGCACACTGCTGTTGTAACCTCTGCTGGGCAATTATTTACTTTTGGTGATGGTACATTTGGTGTTCTGGGTCATGGAGACCGAAAAAGTGTTTCCTTGCCAAAGGAAATAGAGTCCCTGAAGGGTCTTCGTACTGTGCAGGCTGCTTGTGGTGTTTGGCATACTGCTGCAGTTGTGGAAGTCATGGTTGGAAATTCAAGTTCCAGCAACTGCTCTTCGGGGAAGCTGTTTACTTGGGGTGATGGAGACAAAGGTCGACTTGGGCATGGTGACAAGGAAGCCAAACTTGTTCCAACCTGTGTTGTAGCCCTTATTGAACCTAACTTCTGTCAAGTTGCTTGTGGTCATAGTATGACAGTTGCACTTTCTAGATCAGGCCATGTCTATACCATGGGCAGTTGTGTCTATGGCCAGTTAGGAAATCCTCAAGCTGATGGGAAGCTACCAACTCGTGTTGAAGGAAAGCTTTCAAAGAGTTATGTGGAGGAGATAGCTTGTGGTGCATATCATGTTGCGGTTTTAACTTCAAGGACGGAAGTTTACACTTGGGGGAAGGGTGCAAATGGACGTTTAGGCCATGGGGATACTGATGATAGAAACTCCCCAACATTAGTAGAAGCTCTGAAAGACAAACAAGTCAAAAGTATCGCTTGTGGTACAAATTTCACTGCAGCCATATGCCTGCATAAGTGGGTATCTGGTGTTGACCAATCCATGTGTTCTGGCTGCCGTCTGCCATTTAATTTCAAAAGGAAACGCCACAATTGTTATAATTGTGGACTTGTTTTTTGTCATTCATGTAGCAGTAAGAAGTCTATTAAGGCTTCAATGGCACCAAACCCCAACAAACCTTATCGTGTCTGTGATAGTTGTTTTAATAAAATAAGGAAAACTACAGAAACTGATTCTTCATCTCAGTCTTCTATGAGCAGAAGAGGAAGTATTAATCAGGGTTCACTTGAGTTTAATGGCAAGGATGAGAAATTGGATTCCAAATCTCGTAATCAACTTGCCAGGTTCGCTTCAATGGAATCCTTGAAACAAGTGGATAGAAGATCTTCAAAGAAAAATAAGAAATTGGAGTTCAACAGTAGCCGTGTCTCGCCTGTTCCAAATGGAGGTTCACAATCAGGAACAATGAATATTTCTAAATCTTTTAATCCTGTCTTCGGATCATCAAAGAAGTTTTTTTCAGCTTCTGTTCCTGGATCTAGAATTGTTTCCCGGGCAACATCCCCGATATCTAGGCGGCCTAGTCCACCTCGTTCAACTACTCCAACCCCAACGCTGGGAGGACTTACATCCCCAAGGATGGTTGTGGATGATGCTAAGAGGACCAATGATAGCCTCAGTCAGGAGGTTGTTAAATTAAGATCACAGGTGGAAACCTTGACTCGGAAAGCACAACTTCAAGAAATTGAGTTGGAAAGAACAACTAAACAGCTAAAAGAAGCAATAGCAATTGCCAGCGAAGAAACTGCCAAATGCAAAGCAGCAAAGGAAGTGATCAAGTCACTTACTGCCCAGTTGAAGGACATGGCTGAGAGACTTCCTGTAGGAGCAGCCAGGAATGTCAGATCCCCCACTATTACTTCGTTTGGCTCCAATCCTGGTTCCAATGATGTGAGTAATGCATCCGTTGAACGATTGAATATTCAAACAAGAAGCCCAGAATCAGACTTAACTGGATCTAATGACCAGTTGCTTTCAAATGGATCAAGCACTATCACTAACCGTAGTGCAGCTCACAGTAAACATGGTCAATCAGATGCATCTAGCAGAAATGGATGCAAAACAAAGGATAACGAGTCACGTAATGAGACCGAATGGGTTGAGCAAGATGAACCTGGTGTATATATTACTCTCACCTCCCTACCAGGAGATGTAATAGATCTTAAGAGAGTTCGCTTTAGTCGGAAGCGGTTTAGTGAGAAACAAGCAGAACAATGGTGGGCTGAGAATCGGGCGAGAGTATATGAACAGTACAACGTGCGAATGATTGACAAGTCGACCATTGGTGTTGGGAGTGAGGACTTGACTCATTGA | 3420 | 0.4383 | MSSIIMVEVLNLSAGEEFEVLECANSGFGGLLGEWKVSDMRMDESGPVERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLANVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKWRTESRSDGFPSEANSPRTYTRRSSPLNSPFGSNESLQKDSGDHLRLHSPYESPPKNGLDKAFSDVMYYPIPPKGFFPPDSASGSVHSVSSGGSDSMHGHMKTMPMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGECTGDGVLGGGPHRVGSCLDVKMDSLLPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTHIYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSLPKEIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALIEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPQADGKLPTRVEGKLSKSYVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSIKASMAPNPNKPYRVCDSCFNKIRKTTETDSSSQSSMSRRGSINQGSLEFNGKDEKLDSKSRNQLARFASMESLKQVDRRSSKKNKKLEFNSSRVSPVPNGGSQSGTMNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPRMVVDDAKRTNDSLSQEVVKLRSQVETLTRKAQLQEIELERTTKQLKEAIAIASEETAKCKAAKEVIKSLTAQLKDMAERLPVGAARNVRSPTITSFGSNPGSNDVSNASVERLNIQTRSPESDLTGSNDQLLSNGSSTITNRSAAHSKHGQSDASSRNGCKTKDNESRNETEWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNVRMIDKSTIGVGSEDLTH | 1139 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi402g00035 | 1139 | SUPERFAMILY | FYVE/PHD zinc finger | 688 | 759 | IPR011011 | - | |
| Sebi402g00035 | 1139 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 636 | 687 | IPR000408 | - | |
| Sebi402g00035 | 1139 | SUPERFAMILY | PH domain-like | 51 | 159 | - | - | |
| Sebi402g00035 | 1139 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 454 | 464 | IPR000408 | - | |
| Sebi402g00035 | 1139 | MobiDBLite | consensus disorder prediction | 803 | 820 | - | - | |
| Sebi402g00035 | 1139 | MobiDBLite | consensus disorder prediction | 1054 | 1069 | - | - | |
| Sebi402g00035 | 1139 | FunFam | PH, RCC1 and FYVE domains-containing protein 1 | 522 | 693 | - | - | |
| Sebi402g00035 | 1139 | PRINTS | Chromosome condensation regulator RCC1 signature | 454 | 470 | IPR000408 | - | |
| Sebi402g00035 | 1139 | PRINTS | Chromosome condensation regulator RCC1 signature | 344 | 357 | IPR000408 | - | |
| Sebi402g00035 | 1139 | PRINTS | Chromosome condensation regulator RCC1 signature | 413 | 429 | IPR000408 | - |
Showing 1 to 10 of 57 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi402g00035 | - | - | gmx:100791947 | 1941.01 |
Showing 1 to 1 of 1 entries