Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi400g00056 ATGTTTTCTCCATGTGGAAGATCATGCTGTTATGGGGATCCTTCTCTCCGATTGTTGACAAGGACAATTGTAGATGATGAGTACCCTTTAGAAGGTGTCAACTGTGATCAACTTGTAGAGGATCACAAGAGATCGGAGATCGATGAACTCAACAAAAAACATGATGCACTTCAAGATCAATTGTATGTTGAGAAAGCACATGAGAAAAAACTAAATGACATATTGAAGCAAAGGAAAAATGATGGCTGGTGGGAGGCCAAAGTGCAAGCTCTTAGTTGTGAACATGCTGAGGAAATGGAAGCAAGTCTTTTAGAATTACATGAAAAATTGTCAAATGAACTTTCAATCAAGTGTGGAGGAAATGCTTCTCAAGGAGAAGATTCATTTGTTGTTGTCTCTCCTCCAAGCCAAGGAGATGATTCATTTCTACACAACACAAGTAATGAGAATGCTGATGAAAGTGAAAATCATGCTCTTATTACCTTCTCCCCATCAAATCAACACTAA 507 0.3826 MFSPCGRSCCYGDPSLRLLTRTIVDDEYPLEGVNCDQLVEDHKRSEIDELNKKHDALQDQLYVEKAHEKKLNDILKQRKNDGWWEAKVQALSCEHAEEMEASLLELHEKLSNELSIKCGGNASQGEDSFVVVSPPSQGDDSFLHNTSNENADESENHALITFSPSNQH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi400g00056 168 Coils Coil 93 113 - -
Sebi400g00056 168 Coils Coil 40 60 - -
Sebi400g00056 168 MobiDBLite consensus disorder prediction 132 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi400g00056 Sebi-Chr400 965551 966269 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi400g00056 1 115 Type I MADS-box Gene Family AT5G60440 28.205 2.22e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi400g00056 - K12412 gsj:114420861 111.694