Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi400g00047 ATGACAAGGTCTTTTGTTGGGAAGATACAAAAGAGTCTCTCACTCTTTGTACCAACAAGGACTGTACTACACTTGAATGAAGATCAACAGGAAATTGCAACCTCAATTCCAGATGATGTTTTGGAAGGACATTTTGTTGTTCTTGCTACCAATGGTGAGGAAAGCAAAAGGTTTGTTGTTAAGTTAGATTACTTGAGTGACCCTGCATTCTTGAGACTGTTGGACCAAGCTAGGGAGGAGTTTGGTTTCAGGCAGAAGGGAGCTCTTGCAGTCCCTTTCCGGCCTCAAGAATTACAAAAGATTCTACATGATCCAAGAGCATAG 324 0.4167 MTRSFVGKIQKSLSLFVPTRTVLHLNEDQQEIATSIPDDVLEGHFVVLATNGEESKRFVVKLDYLSDPAFLRLLDQAREEFGFRQKGALAVPFRPQELQKILHDPRA 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi400g00047 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 101 IPR003676 GO:0009733
Sebi400g00047 107 Pfam Auxin responsive protein 31 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi400g00047 Sebi-Chr400 685684 686007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi400g00047 6 93 Calmodulin-binding Proteins AT4G34750 37.363 1.75e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi400g00047 - K14488 gmx:100808634 131.339